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create_mutation_df.py

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@@ -12,7 +12,6 @@
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#prapring the main varients protiens dict
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mutation_dict = json_txt_to_dict("data/vocs.txt")
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protien_varients_dict = create_varients_dict(mutation_dict)
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print(protien_varients_dict)
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#-----------------------------------------------------------------------------------------------------------------------
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#the main pipeline
@@ -25,7 +24,7 @@ def main_pipline(protien_varients_dict):
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rows.append([pep[0], pep[1], pep[2], varient])
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base_df = pd.DataFrame(rows, columns=cols)
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print(base_df.head())
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#creating the input files for the predictors
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create_peptides_input_file(base_df)
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create_protien_fasta_file(protien_varients_dict)

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