Beanstalk is a simple, fast work queue.

C macros for hash tables and more

A reliable, high-performance, thread safe, flexsible, clear-model, pure C logging library.

Universal configuration library parser

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

The C Code Archive Network

A unit testing framework for C

This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

An implementation of MultiMarkdown in C, using a PEG grammar - a fork of jgm's peg-markdown. No longer under active development - see MMD 5.

zuluCrypt is a front end to cryptsetup and tcplay and it allows easy management of encrypted block devices

PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. This is a comprehensive upd…

A tool set for short variant discovery in genetic sequence data.

The Cooperative Computing Tools (cctools) enable large scale distributed computations to harness hundreds to thousands of machines from clusters, clouds, and grids.

De novo genome assembly and multisample variant calling

This repository represents iRODS through v3.3.1. New code is at https://github.com/irods/irods.

prolog wrapper for PyGR Nested Containment Lists (NCLs)