-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathcpsE_HS11286.txt
146 lines (146 loc) · 3.9 KB
/
cpsE_HS11286.txt
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
>Feature cps_E_HS11286
1 975 CDS
locus_tag HS11286_00001
gene galF
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product galF UDP-glucose pyrophosphorylase
1291 1920 CDS
locus_tag HS11286_00002
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product putative acid phosphatase
3279 2299 CDS
locus_tag HS11286_00003
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product transposase DDE domain protein
4080 5513 CDS
locus_tag HS11286_00004
gene wzi
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product wzi capsule assembly protein
4080 4103 sig_peptide
locus_tag HS11286_00004
inference ab initio prediction:SignalP:4.0
note predicted cleavage at residue 22
5659 6798 CDS
locus_tag HS11286_00005
gene wza
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product wza integral outer membrane lipoprotein
6798 7232 CDS
locus_tag HS11286_00006
gene wzb
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product wzb protein tyrosine phosphatase
7249 9405 CDS
locus_tag HS11286_00007
gene wzc
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product wzc inner membrane tyrosine autokinase
9491 10927 CDS
locus_tag HS11286_00008
gene wbaP
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product wbaP undecaprenolphosphate Gal-1-P transferase
10961 11872 CDS
locus_tag HS11286_00009
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product putative glycosyl hydrolase
11997 13061 CDS
locus_tag HS11286_00010
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product transposase
13097 14509 CDS
locus_tag HS11286_00011
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product pectate lyase superfamily protein
14530 15414 CDS
locus_tag HS11286_00012
gene wcaN
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product wcaN glycosyltransferase
15455 16684 CDS
locus_tag HS11286_00013
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product hypothetical protein
16711 17835 CDS
locus_tag HS11286_00014
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product hypothetical protein
17828 18658 CDS
locus_tag HS11286_00015
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product putative glycosyltransferase
18738 20174 CDS
locus_tag HS11286_00016
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product putative transmembrane transport protein
20337 21743 CDS
locus_tag HS11286_00017
gene gnd
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product gnd 6-phosphogluconate dehydrogenase
21966 23030 CDS
locus_tag HS11286_00018
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product dTDP-glucose 4,6-dehydratase
23057 23926 CDS
locus_tag HS11286_00019
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product glucose-1-phosphate thymidylyltransferase
23958 24848 CDS
locus_tag HS11286_00020
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product dTDP-4-dehydrorhamnose reductase
24863 25417 CDS
locus_tag HS11286_00021
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product colanic acid transport protein
25597 26763 CDS
locus_tag HS11286_00022
gene ugd
inference ab initio prediction:Prodigal:2.50
codon_start 1
transl_table 11
product ugd UDP-glucose 6-dehydrogenase: forward