This is a home for notebooks which demonstrate how to access and work with TCIA datasets.
- TCIA_Linux_Data_Retriever_App.ipynb - A tutorial on how to install the NBIA Data Retriever command-line Data Retriever utility on Linux and use it to download TCIA datasets
- TCIA_REST_API_Queries_for_Public_Datasets.ipynb - A Python tutorial on how to use TCIA's REST API to query public datasets (no user account required)
- TCIA_Series_UID_Report.ipynb - Ingests a TCIA manifest file and creates reports about what it contains
- ACNS0332.ipynb - A tutorial on accessing DICOM images, clinical data, and tumor annotations (3d segmentations & seed points) from the "Chemotherapy and Radiation Therapy in Treating Young Patients With Newly Diagnosed, Previously Untreated, High-Risk Medulloblastoma/PNET (ACNS0332)" Collection dataset hosted on TCIA