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kstawiski
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caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file form…
A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods
Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
High dimensional weighted gene co-expression network analysis
Analysis and visualisation of the cryptocurrency market
R package for automation of machine learning, forecasting, model evaluation, and model interpretation
EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.
Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.
Spatial Transcriptomics Capture Location Deconvolution
📝 Easily create questionnaire-type forms with Shiny
Microsatellite instability (MSI) detection for tumor only data.
Scripts written for my Bioinformatics-along on YouTube: https://www.youtube.com/playlist?list=PLzfP3sCXUnxEu5S9oXni1zmc1sjYmT1L9
Mutational signature analysis for low statistics SNV data
Quantify and interpret divers of variation in multilevel gene expression experiments
Shiny app with custom css to prepare and manage a wedding
Script to select the best subset of variables based on genetic algorithm in R
OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throug…
Open-Source Software for Omic Data Analysis and Visualization
mlim: single and multiple imputation with automated machine learning
