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Starred repositories

12 stars written in R
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An implementation of the Grammar of Graphics in R

R 6,595 2,039 Updated Jan 28, 2025

Make Complex Heatmaps

R 1,337 229 Updated Dec 19, 2024

📊 A universal enrichment tool for interpreting omics data

R 1,052 255 Updated Nov 29, 2024

Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.

R 173 89 Updated Mar 20, 2024

deconstructSigs

R 140 47 Updated Apr 24, 2023

Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing.

R 69 26 Updated Aug 22, 2021

RADseq workflow using STACKS

R 57 27 Updated Dec 12, 2024

Multi-sample somatic variant caller

R 49 15 Updated Jan 27, 2022
R 32 13 Updated Jun 15, 2023

VisCap is an open flexible, software program targeted to clinical laboratories for inference and visualization of germline copy number variants (CNVs) from targeted next-generation sequencing data.…

R 22 12 Updated Dec 13, 2019

Create docker image for adtex tool

R 4 4 Updated Dec 23, 2016

❗ This is a read-only mirror of the CRAN R package repository. iCluster — Integrative clustering of multiple genomic data types

R 3 Updated Mar 20, 2014