book.bib.bak

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@Book{xie2015,
  title = {Dynamic Documents with {R} and knitr},
  author = {Yihui Xie},
  publisher = {Chapman and Hall/CRC},
  address = {Boca Raton, Florida},
  year = {2015},
  edition = {2nd},
  note = {ISBN 978-1498716963},
  url = {http://yihui.name/knitr/},
}
@Book{cox2006principles,
  title={Principles of Statistical Inference},
  author={Cox, D.R.},
  isbn={9781139459136},
  url={https://books.google.co.jp/books?id=nRgtGZXi2KkC},
  year={2006},
  publisher={Cambridge University Press}
}
@Book{gelman2013bayesian,
  title={Bayesian Data Analysis, Third Edition},
  author={Gelman, A. and Carlin, J.B. and Stern, H.S. and Dunson, D.B. and Vehtari, A. and Rubin, D.B.},
  isbn={9781439840955},
  lccn={2013039507},
  series={Chapman \& Hall/CRC Texts in Statistical Science},
  url={https://books.google.co.uk/books?id=ZXL6AQAAQBAJ},
  year={2013},
  publisher={Taylor \& Francis}
}
@book{lesaffre2012bayesian,
  title={Bayesian Biostatistics},
  author={Lesaffre, E. and Lawson, A.B.},
  isbn={9781118314579},
  lccn={2012004237},
  series={Statistics in Practice},
  url={https://books.google.co.uk/books?id=WV7KVjEQnJMC},
  year={2012},
  publisher={Wiley}
}
@article{Cox1946,
author = {R. T. Cox},
title = {Probability, Frequency and Reasonable Expectation},
journal = {American Journal of Physics},
volume = {14},
number = {1},
pages = {1-13},
year = {1946},
doi = {10.1119/1.1990764},
URL = {https://doi.org/10.1119/1.1990764},
eprint = {https://doi.org/10.1119/1.1990764}
}

@Article{Fisher1922,
  author         = {R. A. Fisher},
  title          = {On the Mathematical Foundations of Theoretical Statistics},
  journal        = {Philosophical Transactions of the Royal Society of London. Series A, Containing Papers of a Mathematical or Physical Character},
  year           = {1922},
  volume         = {222},
  pages          = {309-368},
  issn           = {02643952},
  keywords       = {qualityAssured},
  owner          = {ccwang},
  publisher      = {The Royal Society},
  timestamp      = {2017.11.19},
  url            = {http://www.jstor.org/stable/91208},
}

@Book{good2006permutation,
  title          = {Permutation, Parametric, and Bootstrap Tests of Hypotheses},
  publisher      = {Springer New York},
  year           = {2006},
  author         = {Good, P.I.},
  series         = {Springer Series in Statistics},
  isbn           = {9780387271583},
  keywords       = {qualityAssured},
  lccn           = {2004050436},
  url            = {https://books.google.co.uk/books?id=tQtedCBEgeAC},
}

@Book{Armitage2008,
  title     = {Statistical methods in medical research},
  publisher = {John Wiley \& Sons},
  year      = {2008},
  author    = {Armitage, Peter and Berry, Geoffrey and Matthews, John Nigel Scott},
  owner     = {ccwang},
  timestamp = {2017.12.21},
}

@Book{van2004biostatistics,
  title     = {Biostatistics: A Methodology For the Health Sciences},
  publisher = {Wiley},
  year      = {2004},
  author    = {van Belle, G. and Fisher, L.D. and Heagerty, P.J. and Lumley, T.},
  series    = {Wiley Series in Probability and Statistics},
  isbn      = {9780471602354},
  lccn      = {2004040491},
  owner     = {ccwang},
  timestamp = {2017.12.27},
  url       = {https://books.google.co.uk/books?id=KSh8IOrLPzwC},
}

@Article{Robinson1991,
  author    = {Robinson, Laurence D and Jewell, Nicholas P},
  title     = {Some surprising results about covariate adjustment in logistic regression models},
  journal   = {International Statistical Review},
  year      = {1991},
  pages     = {227--240},
  owner     = {ccwang},
  publisher = {JSTOR},
  timestamp = {2018.01.24},
}

@Article{Greenland2016,
  author    = {Greenland, Sander and Daniel, Rhian and Pearce, Neil},
  title     = {Outcome modelling strategies in epidemiology: traditional methods and basic alternatives},
  journal   = {International journal of epidemiology},
  year      = {2016},
  volume    = {45},
  number    = {2},
  pages     = {565--575},
  file      = {:/home/ccwang/pCloudDrive/pCloud Sync/JabRef/pdfpapers/greenland2016.pdf:PDF},
  owner     = {ccwang},
  publisher = {Oxford University Press},
  timestamp = {2018.01.25},
}

@Article{Pepe2007,
  author    = {Pepe, Margaret S and Feng, Ziding and Huang, Ying and Longton, Gary and Prentice, Ross and Thompson, Ian M and Zheng, Yingye},
  title     = {Integrating the predictiveness of a marker with its performance as a classifier},
  journal   = {American journal of epidemiology},
  year      = {2007},
  volume    = {167},
  number    = {3},
  pages     = {362--368},
  owner     = {ccwang},
  publisher = {Oxford University Press},
  timestamp = {2018.01.30},
}

@Book{Raudenbush2002,
  title     = {Hierarchical linear models: Applications and data analysis methods},
  publisher = {Sage},
  year      = {2002},
  author    = {Raudenbush, Stephen W and Bryk, Anthony S},
  volume    = {1},
  owner     = {ccwang},
  timestamp = {2018.02.19},
}

@Article{Bland1986,
  author    = {Bland, J Martin and Altman, DouglasG},
  title     = {Statistical methods for assessing agreement between two methods of clinical measurement},
  journal   = {The lancet},
  year      = {1986},
  volume    = {327},
  number    = {8476},
  pages     = {307--310},
  file      = {:/home/ccwang/pCloudDrive/pCloud Sync/JabRef/pdfpapers/10.1016@S0140-67368690837-8.pdf:PDF},
  owner     = {ccwang},
  publisher = {Elsevier},
  timestamp = {2018.02.19},
}

@Book{DeFinetti1974,
  title     = {Theory of Probability: A Critical Introductory Treatment. Transl. by Antonio Machi and Adrian Smith},
  publisher = {J. Wiley},
  year      = {1974},
  author    = {De Finetti, Bruno},
  owner     = {ccwang},
  timestamp = {2018.02.25},
}

@Article{Smith1995,
  author    = {Smith, Adrian},
  title     = {A conversation with Dennis Lindley},
  journal   = {Statistical Science},
  year      = {1995},
  volume    = {10},
  number    = {3},
  pages     = {305--319},
  owner     = {ccwang},
  publisher = {JSTOR},
  timestamp = {2018.02.25},
}

@Misc{Snijders1999,
  author    = {Snijders, Tom and Bosker, Roel},
  title     = {Multilevel analysis: An introduction to basic and applied multilevel analysis},
  year      = {1999},
  owner     = {ccwang},
  publisher = {London: Sage},
  timestamp = {2018.02.28},
}

@Article{Robinson1950,
  author    = {W. S. Robinson},
  title     = {Ecological Correlations and the Behavior of Individuals},
  journal   = {American Sociological Review},
  year      = {1950},
  volume    = {15},
  number    = {3},
  pages     = {351-357},
  issn      = {00031224},
  owner     = {ccwang},
  publisher = {[American Sociological Association, Sage Publications, Inc.]},
  timestamp = {2018.03.01},
  url       = {http://www.jstor.org/stable/2087176},
}

@Article{Mann2004,
  author    = {Mann, Vera and De Stavola, Bianca L and Leon, David A},
  title     = {Separating within and between effects in family studies: an application to the study of blood pressure in children},
  journal   = {Statistics in medicine},
  year      = {2004},
  volume    = {23},
  number    = {17},
  pages     = {2745--2756},
  owner     = {ccwang},
  publisher = {Wiley Online Library},
  timestamp = {2018.03.07},
}

@Book{Verbeke1997,
  title     = {Linear mixed models for longitudinal data},
  publisher = {Springer},
  year      = {1997},
  author    = {Verbeke, Geert},
  booktitle = {Linear mixed models in practice},
  owner     = {ccwang},
  pages     = {63--153},
  timestamp = {2018.03.10},
}

@Book{Collins2010a,
  title     = {Latent class and latent transition analysis. Hoboken},
  publisher = {NJ: Wiley},
  year      = {2010},
  author    = {Collins, LM and Lanza, ST},
  owner     = {ccwang},
  timestamp = {2018.04.12},
}

@Article{Leech2017,
  author    = {Leech, Rebecca M and Worsley, Anthony and Timperio, Anna and McNaughton, Sarah A},
  title     = {Temporal eating patterns: a latent class analysis approach},
  journal   = {International Journal of Behavioral Nutrition and Physical Activity},
  year      = {2017},
  volume    = {14},
  number    = {1},
  pages     = {3},
  owner     = {ccwang},
  publisher = {BioMed Central},
  timestamp = {2018.04.12},
}

@Article{Rindskopf1986,
  author    = {Rindskopf, David and Rindskopf, Wallace},
  title     = {The value of latent class analysis in medical diagnosis},
  journal   = {Statistics in medicine},
  year      = {1986},
  volume    = {5},
  number    = {1},
  pages     = {21--27},
  owner     = {ccwang},
  publisher = {Wiley Online Library},
  timestamp = {2018.04.12},
}

@Article{Neyman1923,
  author    = {Neyman, JS},
  title     = {On the Application of Probability Theory to Agricultural Experiments. Essay on Principles. Section 9.(Tlanslated and edited by DM Dabrowska and TP Speed, Statistical Science (1990), 5, 465-480)},
  journal   = {Annals of Agricultural Sciences},
  year      = {1923},
  volume    = {10},
  pages     = {1--51},
  owner     = {ccwang},
  timestamp = {2018.04.21},
}

@Article{Rubin1974,
  author    = {Rubin, Donald B},
  title     = {Estimating causal effects of treatments in randomized and nonrandomized studies.},
  journal   = {Journal of educational Psychology},
  year      = {1974},
  volume    = {66},
  number    = {5},
  pages     = {688},
  owner     = {ccwang},
  publisher = {American Psychological Association},
  timestamp = {2018.04.21},
}

@Article{Dawid2000,
  author    = {Dawid, A Philip},
  title     = {Causal inference without counterfactuals},
  journal   = {Journal of the American Statistical Association},
  year      = {2000},
  volume    = {95},
  number    = {450},
  pages     = {407--424},
  owner     = {ccwang},
  publisher = {Taylor \& Francis},
  timestamp = {2018.04.21},
}

@Article{Laan2017,
  author    = {van der Laan, Mark J and Rose, Sherri},
  title     = {Targeted Learning in Data Science},
  journal   = {New York, NY: Springer International Publishing. doi},
  year      = {2017},
  volume    = {10},
  pages     = {978--3},
  owner     = {ccwang},
  publisher = {Springer},
  timestamp = {2018.04.21},
}

@Article{Cattaneo2010d,
  author    = {Cattaneo, Matias D},
  title     = {Efficient semiparametric estimation of multi-valued treatment effects under ignorability},
  journal   = {Journal of Econometrics},
  year      = {2010},
  volume    = {155},
  number    = {2},
  pages     = {138--154},
  owner     = {ccwang},
  publisher = {Elsevier},
  timestamp = {2018.04.26},
}

@Manual{R-bookdown,
  title  = {bookdown: Authoring Books and Technical Documents with R Markdown},
  author = {Yihui Xie},
  year   = {2018},
  note   = {R package version 0.7},
  url    = {https://CRAN.R-project.org/package=bookdown},
}

@Article{Pearl2011,
  author    = {Pearl, Judea},
  title     = {Invited commentary: understanding bias amplification},
  journal   = {American journal of epidemiology},
  year      = {2011},
  volume    = {174},
  number    = {11},
  pages     = {1223--1227},
  publisher = {Oxford University Press},
}

@Article{Rosenbaum1983,
  author    = {Rosenbaum, Paul R and Rubin, Donald B},
  title     = {The central role of the propensity score in observational studies for causal effects},
  journal   = {Biometrika},
  year      = {1983},
  volume    = {70},
  number    = {1},
  pages     = {41--55},
  publisher = {Oxford University Press},
}

@Article{Abadie2016,
  author    = {Abadie, Alberto and Imbens, Guido W},
  title     = {Matching on the estimated propensity score},
  journal   = {Econometrica},
  year      = {2016},
  volume    = {84},
  number    = {2},
  pages     = {781--807},
  owner     = {ccwang},
  publisher = {Wiley Online Library},
  timestamp = {2018.04.29},
}

@Article{Austin2011,
  author    = {Austin, Peter C},
  title     = {An introduction to propensity score methods for reducing the effects of confounding in observational studies},
  journal   = {Multivariate behavioral research},
  year      = {2011},
  volume    = {46},
  number    = {3},
  pages     = {399--424},
  owner     = {ccwang},
  publisher = {Taylor \& Francis},
  timestamp = {2018.04.29},
}

@InCollection{Cox1992,
  author    = {Cox, David R},
  title     = {Regression models and life-tables},
  booktitle = {Breakthroughs in statistics},
  publisher = {Springer},
  year      = {1992},
  pages     = {527--541},
}

@Article{Cox1975,
  author    = {Cox, David R},
  title     = {Partial likelihood},
  journal   = {Biometrika},
  year      = {1975},
  volume    = {62},
  number    = {2},
  pages     = {269--276},
  publisher = {Oxford University Press},
}

@Article{Cox1972,
  author  = {Cox, David R},
  title   = {Regression models and life-tables (with discussions)},
  journal = {Jr Stat Soc B},
  year    = {1972},
  volume  = {34},
  pages   = {187--220},
}

@Article{Cox1972b,
  author  = {Cox, David R},
  title   = {Models and life-tables regression},
  journal = {JR Stat. Soc. Ser. B},
  year    = {1972},
  volume  = {34},
  pages   = {187--220},
}

@Article{Royston2002,
  author    = {Royston, Patrick and Parmar, Mahesh KB},
  title     = {Flexible parametric proportional-hazards and proportional-odds models for censored survival data, with application to prognostic modelling and estimation of treatment effects},
  journal   = {Statistics in medicine},
  year      = {2002},
  volume    = {21},
  number    = {15},
  pages     = {2175--2197},
  publisher = {Wiley Online Library},
}

@Article{uemura2015breakfast,
  author    = {Uemura, Mayu and Yatsuya, Hiroshi and Hilawe, Esayas Haregot and Li, Yuanying and Wang, Chaochen and Chiang, Chifa and Otsuka, Rei and Toyoshima, Hideaki and Tamakoshi, Koji and Aoyama, Atsuko},
  title     = {Breakfast skipping is positively associated with incidence of type 2 diabetes mellitus: evidence from the Aichi Workers’ Cohort Study},
  journal   = {Journal of epidemiology},
  year      = {2015},
  volume    = {25},
  number    = {5},
  pages     = {351--358},
  publisher = {Japan Epidemiological Association},
}

@Article{hosmer1980goodness,
  author    = {Hosmer, David W and Lemesbow, Stanley},
  title     = {Goodness of fit tests for the multiple logistic regression model},
  journal   = {Communications in statistics-Theory and Methods},
  year      = {1980},
  volume    = {9},
  number    = {10},
  pages     = {1043--1069},
  publisher = {Taylor \& Francis},
}

@Article{johnson2009shifting,
  author    = {Johnson, Sindhu R and Feldman, Brian M and Pope, Janet E and Tomlinson, George A},
  title     = {Shifting our thinking about uncommon disease trials: the case of methotrexate in scleroderma},
  journal   = {The Journal of rheumatology},
  year      = {2009},
  volume    = {36},
  number    = {2},
  pages     = {323--329},
  owner     = {wangcc-me},
  publisher = {The Journal of Rheumatology},
  timestamp = {2018-08-30},
}

@Book{spiegelhalter2004bayesian,
  title     = {Bayesian approaches to clinical trials and health-care evaluation},
  publisher = {John Wiley \& Sons},
  year      = {2004},
  author    = {Spiegelhalter, David J and Abrams, Keith R and Myles, Jonathan P},
  volume    = {13},
  owner     = {wangcc-me},
  timestamp = {2018-08-30},
}

@Book{Collett2015,
  title     = {Modelling survival data in medical research},
  publisher = {Chapman and Hall/CRC},
  year      = {2015},
  author    = {Collett, David},
}

@Article{sauerbrei2007new,
  author    = {Sauerbrei, Willi and Royston, Patrick and Look, Maxime},
  title     = {A new proposal for multivariable modelling of time-varying effects in survival data based on fractional polynomial time-transformation},
  journal   = {Biometrical Journal},
  year      = {2007},
  volume    = {49},
  number    = {3},
  pages     = {453--473},
  publisher = {Wiley Online Library},
}

@Article{wynant2014impact,
  author    = {Wynant, Willy and Abrahamowicz, Michal},
  title     = {Impact of the model-building strategy on inference about nonlinear and time-dependent covariate effects in survival analysis},
  journal   = {Statistics in medicine},
  year      = {2014},
  volume    = {33},
  number    = {19},
  pages     = {3318--3337},
  publisher = {Wiley Online Library},
}

@Article{tinmouth2004low,
  author    = {Tinmouth, Alan and Tannock, Ian F and Crump, Michael and Tomlinson, George and Brandwein, Joseph and Minden, Mark and Sutton, David},
  title     = {Low-dose prophylactic platelet transfusions in recipients of an autologous peripheral blood progenitor cell transplant and patients with acute leukemia: a randomized controlled trial with a sequential Bayesian design},
  journal   = {Transfusion},
  year      = {2004},
  volume    = {44},
  number    = {12},
  pages     = {1711--1719},
  publisher = {Wiley Online Library},
}

@InProceedings{Raftery92howmany,
  author    = {Adrian E. Raftery and Steven Lewis},
  title     = {How Many Iterations in the Gibbs Sampler?},
  booktitle = {In Bayesian Statistics 4},
  year      = {1992},
  pages     = {763--773},
  publisher = {Oxford University Press},
}

@Article{Spiegelhalter2002,
  author    = {Spiegelhalter, David J and Best, Nicola G and Carlin, Bradley P and Van Der Linde, Angelika},
  title     = {Bayesian measures of model complexity and fit},
  journal   = {Journal of the Royal Statistical Society: Series B (Statistical Methodology)},
  year      = {2002},
  volume    = {64},
  number    = {4},
  pages     = {583--639},
  publisher = {Wiley Online Library},
}

@Article{Seidelmann2018,
  author        = {Seidelmann, Sara B and Claggett, Brian and Cheng, Susan and Henglin, Mir and Shah, Amil and Steffen, Lyn M and Folsom, Aaron R and Rimm, Eric B and Willett, Walter C and Solomon, Scott D},
  title         = {Dietary carbohydrate intake and mortality: a prospective cohort study and meta-analysis},
  journal       = {The Lancet Public Health},
  year          = {2018},
  volume        = {3},
  number        = {9},
  pages         = {e419--e428},
  __markedentry = {[takeshi:]},
  publisher     = {Elsevier},
}

@Article{diggle2002childhood,
  author    = {Diggle, Peter and Moyeed, Rana and Rowlingson, Barry and Thomson, Madeleine},
  title     = {Childhood malaria in the Gambia: a case-study in model-based geostatistics},
  journal   = {Journal of the Royal Statistical Society: Series C (Applied Statistics)},
  year      = {2002},
  volume    = {51},
  number    = {4},
  pages     = {493--506},
  publisher = {Wiley Online Library},
}

@Article{diggle1994informative,
  author    = {Diggle, Peter and Kenward, Michael G},
  title     = {Informative drop-out in longitudinal data analysis},
  journal   = {Applied statistics},
  year      = {1994},
  pages     = {49--93},
  owner     = {wangcc-me},
  publisher = {JSTOR},
  timestamp = {2018-11-23},
}

@Comment{jabref-meta: databaseType:bibtex;}