ValueError: LOCUS line does not contain - at position 75 in date

[tjcu408]

There is an issue when I run PhiSpy on *.gbk files obtained by Prokka, I don't know why.

$ PhiSpy.py -o outfile *.gbk
error message:
Traceback (most recent call last):
File "/home/meta/miniconda3/envs/bacteria/lib/python3.9/site-packages/Bio/File.py", line 72, in as_handle
with open(handleish, mode, **kwargs) as fp:
TypeError: expected str, bytes or os.PathLike object, not TextIOWrapper

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
File "/home/meta/miniconda3/envs/bacteria/bin/PhiSpy.py", line 10, in
sys.exit(run())
File "/home/meta/miniconda3/envs/bacteria/lib/python3.9/site-packages/PhiSpyModules/main.py", line 122, in run
main(sys.argv)
File "/home/meta/miniconda3/envs/bacteria/lib/python3.9/site-packages/PhiSpyModules/main.py", line 44, in main
args_parser.record = PhiSpyModules.SeqioFilter(filter(lambda x: len(x.seq) > args_parser.min_contig_size, SeqIO.parse(handle, "genbank")))
File "/home/meta/miniconda3/envs/bacteria/lib/python3.9/site-packages/PhiSpyModules/seqio_filter.py", line 33, in init
for n, item in enumerate(content):
File "/home/meta/miniconda3/envs/bacteria/lib/python3.9/site-packages/Bio/SeqIO/Interfaces.py", line 72, in next
return next(self.records)
File "/home/meta/miniconda3/envs/bacteria/lib/python3.9/site-packages/Bio/GenBank/Scanner.py", line 516, in parse_records
record = self.parse(handle, do_features)
File "/home/meta/miniconda3/envs/bacteria/lib/python3.9/site-packages/Bio/GenBank/Scanner.py", line 499, in parse
if self.feed(handle, consumer, do_features):
File "/home/meta/miniconda3/envs/bacteria/lib/python3.9/site-packages/Bio/GenBank/Scanner.py", line 465, in feed
self._feed_first_line(consumer, self.line)
File "/home/meta/miniconda3/envs/bacteria/lib/python3.9/site-packages/Bio/GenBank/Scanner.py", line 1443, in _feed_first_line
raise ValueError(
ValueError: LOCUS line does not contain - at position 75 in date:
LOCUS 1 398700 bp DNA linear 25-6月-2024