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48 stars written in R
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Convert statistical analysis objects from R into tidy format

R 1,467 303 Updated Nov 7, 2024

📍 Repel overlapping text labels away from each other in your ggplot2 figures.

R 1,227 96 Updated Nov 4, 2024

🌌 The R easystats-project

R 1,110 79 Updated Nov 22, 2024

Circular visualization in R

R 979 148 Updated Nov 11, 2023

🎨 Visualisation toolbox for beautiful and publication-ready figures

R 893 42 Updated Jan 1, 2025

An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

R 766 158 Updated Aug 4, 2024

Easily add significance brackets to your ggplots

R 594 43 Updated Aug 11, 2024

📊 Circular and Rectangular Manhattan Plot

R 540 114 Updated May 20, 2024

NicheNet: predict active ligand-target links between interacting cells

R 502 119 Updated Sep 5, 2024

Palettes for R based on the Scientific Colour-Maps

R 438 24 Updated Dec 9, 2023

bayesplot R package for plotting Bayesian models

R 434 84 Updated Dec 14, 2024

🔮 Easy access to model information for various model objects

R 406 39 Updated Jan 3, 2025

High dimensional weighted gene co-expression network analysis

R 371 36 Updated Oct 22, 2024

Extract and Visualize the Results of Multivariate Data Analyses

R 361 103 Updated Jul 5, 2023

Combination matrix axis for 'ggplot2' to create 'UpSet' plots

R 354 25 Updated Jun 24, 2024

R package implementation of Milo for testing for differential abundance in KNN graphs

R 348 23 Updated Nov 20, 2024

Multi-Omics Factor Analysis

R 311 52 Updated Jun 29, 2024

Functions for identifying and characterizing continuous developmental trajectories in single-cell data.

R 277 43 Updated Apr 23, 2024

R Package for Time Series Clustering Along with Optimizations for DTW

R 260 29 Updated Jul 23, 2024

Multi-Omics Factor Analysis

R 233 60 Updated Sep 30, 2020

Comparison of methods for trajectory inference on single-cell data 🥇

R 202 42 Updated Aug 30, 2023

Automated, probabilistic assignment of cell types in scRNA-seq data

R 199 83 Updated Jan 9, 2023

Haplotype-aware CNV analysis from single-cell RNA-seq

R 172 23 Updated Dec 5, 2024

Brings bulk and pseudobulk transcriptomics to the tidyverse

R 166 25 Updated Dec 13, 2024

R data package for annotating/converting Gene IDs

R 162 33 Updated Feb 21, 2023

Network construction, analysis, and comparison for microbial compositional data

R 157 28 Updated Dec 10, 2024

AUCell: score single cells with gene regulatory networks

R 136 28 Updated Mar 9, 2024

SingleCellNet: classify single cells across species and platforms

R 132 29 Updated Aug 21, 2023
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