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Extracting features from 4096 x 4096 patches (M x L x D) #45

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ekansh09 opened this issue Apr 18, 2023 · 0 comments
Open

Extracting features from 4096 x 4096 patches (M x L x D) #45

ekansh09 opened this issue Apr 18, 2023 · 0 comments

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@ekansh09
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Hello @Richarizardd,

Could you please guide me on how to extract vits_tcga_pancancer_dino_pt_patch_features for every 4096 x 4096 patch and save them in the extracted_mag20x_patch4096_fp folder?

Also, I was wondering if there is a feature extraction pipeline available for this task, or do we need to extract features for each 4096 x 4096 patch using HIPT_4k api and then vstack all of them? If you have a code for this, it would be great if you could share it.

Thank you!

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