Public facing notes page

Resources for teaching/preparing to teach bioimage analysis

Colab Notebooks covering deep learning tools for biomolecular structure prediction and design

Papers from the computer science community to read and discuss.

Chaste - Cancer Heart And Soft Tissue Environment - main public repository.

Illustrations created by Henning Falk for the Zarr community

A collection of Python Jupyter Notebooks with Generative Artificial Intelligence related contents

A web app for creating animated GIFs from Desmos graphs

DataViz protocols book for wet lab scientists

COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.

Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images

A bot that uses LLMs to respond on bluesky

Illustrations were contracted by the Heinrich Heine University of Düsseldorf in the frame of the consortium NFDI4BIOIMAGE from Henning Falk for the purpose of education and public outreach (CC-BY)

A collection of notebooks for gaining insights into presentation slides through multimodal AI models.

[NeurIPS 2023] Reflexion: Language Agents with Verbal Reinforcement Learning

[NeurIPS'23 Oral] Visual Instruction Tuning (LLaVA) built towards GPT-4V level capabilities and beyond.

MOrphing histoPAthology DIffusion models for explainability of AI pipelines in medical image analysis.

YSDA course in Natural Language Processing

Machine learning in Python with scikit-learn MOOC

skimage-tutorials: a collection of tutorials for the scikit-image package.

Scipy Cookbook

Example notebooks and tricks to interact with OMERO from Python

Boost LaTeX typesetting efficiency with preview, compile, autocomplete, colorize, and more.

Machine learning metrics for distributed, scalable PyTorch applications.

Python tools for analysing body movements across space and time

Python libraries for loading, running and packaging bioimage.io models

A collection of Jupyter notebooks explaining prompt engineering