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  1. drorlab/pensa drorlab/pensa Public

    PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.

    Python 87 17

  2. drorlab/atom3d drorlab/atom3d Public

    ATOM3D: tasks on molecules in three dimensions

    Python 303 35

  3. bio-phys/memdiff bio-phys/memdiff Public

    Implementation of corrections for diffusion coefficients in membrane simulations.

    Python 10 1

  4. drorlab/GPCR-mining drorlab/GPCR-mining Public

    Functions to scrape GPCR data from the web.

    Python 16 2

  5. bio-phys/cnt-gaff bio-phys/cnt-gaff Public

    Build atomistic structures of carbon nanotubes with the possibility to add functional groups (OH, COOH, COO-) and assigns generalized Amber (GAFF) parameters to them.

    Rich Text Format 21 7

  6. bio-phys/cnt-martini bio-phys/cnt-martini Public

    Generates Martini models for open carbon nanotubes to use with Gromacs.

    Python 13 4