Ultra-fast preprocessing and quality control for long-read sequencing data

Automatic C-Go Bindings Generator for Go Programming Language

quick-n-dirty tabix in go using cgo

cram reader in golang via system call to samtools

DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing data.

Nextflow runs monitoring and organisation UI

Run your GitHub Actions locally 🚀

RTG Tools: Utilities for accurate VCF comparison and manipulation

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

</> htmx - high power tools for HTML

Short-read sequencing tools

Go-blueprint allows users to spin up a quick Go project using a popular framework

Awesome-go list with stars. Automatically updated.

Better Awesome Go List with 🔥 Stars 🌐 Dependent Packages 📝 Last Commit

Go / Golang Bioinformatics Library

High performance, minimalist Go web framework

Blazing fast, structured, leveled logging in Go.

SQL-first Golang ORM

☁️ Live reload for Go apps

Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders

Web application to collect and visualise data across multiple MultiQC runs.

Automatically source dotenv files into your Nextflow scope

A bioinformatics pipeline to phase and impute genetic data

fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

Accelerating the deduplication and collapsing process for reads with Unique Molecular Identifiers (UMI). Heavily optimized for scalability and orders of magnitude faster than a previous tool.

A versatile pairwise aligner for genomic and spliced nucleotide sequences

Nanopore demultiplexing, QC and alignment pipeline

Home for the GA4GH Quality Control of Whole Genome Sequencing metrics and reference implementations

reference implementation of GA4GH WGS Quality Control Standards