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Achievement: Arctic Code Vault ContributorAchievement: Pull Sharkx2

Achievements

Achievement: Arctic Code Vault ContributorAchievement: Pull Sharkx2

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2 stars written in Nextflow
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nf-core / viralrecon

Assembly and intrahost/low-frequency variant calling for viral samples

Nextflow 129 114 Updated Jan 20, 2025

TRON-Bioinformatics / covigator-ngs-pipeline

A Nextflow pipeline for NGS variant calling on SARS-CoV-2. From FASTQ files to normalized and annotated VCF files from GATK, BCFtools, LoFreq and iVar.

Nextflow 18 7 Updated Jul 11, 2024