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Commits on Jan 4, 2020

• fix plugin suffix for OpenBSD and NetBSD

  msuchard

  committed
  a05c94f

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Commits on Dec 20, 2019

• add glibtoolize / libtoolize

  msuchard

  committed
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Commits on Oct 31, 2019

• Pointed tutorial link to location of version 3

  plewis

  authored
  4056cfb

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Commits on Jul 26, 2019

• Merge pull request beagle-dev#137 from matsengrp/master

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  msuchard

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Commits on Jun 14, 2019

• Merge pull request beagle-dev#139 from beagle-dev/category-models

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  ayresdl

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  63d18f8

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• updated version number to reflect api change

  ayresdl

  committed
  d042972

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• memory leak bug fix for derivative calculation in GPU implementation

  ayresdl

  committed
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Commits on Jun 2, 2019

• adding GPU implementation of multi model categories

  ayresdl

  committed
  cf37da0

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• added GPU implementation of multi model categories

  ayresdl

  committed
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Commits on Jun 1, 2019

• experimenting with new api call for model categories with diff. eigen decomp.

  ayresdl

  committed
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Commits on May 30, 2019

• added scripts to compile universal (32/64 bit) binaries on macOS

  ayresdl

  committed
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Commits on May 28, 2019

• implemented support for mix of scaling on/off for multi-partition integration on GPU

  ayresdl

  committed
  65bd7ee

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Commits on May 14, 2019

• small bug fix in CUDA implementation

  ayresdl

  committed
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Commits on May 10, 2019

• CUDA stream synchronisation improvements

  ayresdl

  committed
  8d8b910

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Commits on May 2, 2019

• compilation fix for synthetictest threading

  ayresdl

  committed
  d2dbd2e

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• added synthetictest option to use client-side threads, each running a separate beagle instance

  ayresdl

  committed
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Commits on Apr 19, 2019

• bug fixes for padded odd state count with SSE impl

  ayresdl

  committed
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Commits on Apr 4, 2019

• fixed issue with synthetictest compilation when compiling without Nexus Class Library

  ayresdl

  committed
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Commits on Mar 22, 2019

• swig_python .gitignore

  matsen

  committed
  3536bcd

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• Adding files to the .gitignore.

  matsen

  committed
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Commits on Mar 5, 2019

• modifications to empirical data set benchmarking; if custom topology used with newtree option, then it is used in last replicate

  ayresdl

  committed
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Commits on Mar 1, 2019

• added options to synthetictest to read in alignment and tree files; added benchmark file used for empirical testing for v3 app note

  ayresdl

  committed
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Commits on Feb 23, 2019

• add error # in case code is not recognized

  msuchard

  committed
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Commits on Dec 3, 2018

• removing pre-release status for 3.1.2

  ayresdl

  committed
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• change to not use libtool for plugin loading by default, causes issues with loading CPU threaded implementation

  ayresdl

  committed
  e22cb0b

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• gcc pthread compilation/linking fixes

  ayresdl

  committed
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Commits on Nov 30, 2018

• Update README.md

  ayresdl

  authored
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Commits on Nov 29, 2018

• tweak to CPU auto-threading heuristic for higher state counts

  ayresdl

  committed
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Commits on Nov 26, 2018

• tweaks to CPU auto-threading heuristics; adjustment to benchmarking for app note

  ayresdl

  committed
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• tweaks to CPU auto-threading heuristics

  ayresdl

  committed
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Commits on Nov 23, 2018

• Merge branch 'master' of github.com:beagle-dev/beagle-lib

  ayresdl

  committed
  7d0ff56

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• v3 app note benchmark script updates

  ayresdl

  committed
  9d19d09

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• fixed issue with non nucleotide state counts on AMD GPUs

  ayresdl

  committed
  fcb1aba

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• fixed issue with padded state counts on AMD GPUs

  ayresdl

  committed
  92b1650

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Commits on Nov 20, 2018

• fixed issue with odd state counts and CPU SSE implementation; changed version to 3.1.2 pre-release

  ayresdl

  committed
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