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MRtrix provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density
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nadluru/mrtrix3
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MRtrix
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The complete documentation for MRtrix is in doc/index.html,
including a detailed decription of the installation procedure.
Quick install:
1. Unpack archive and compile:
tar xjf mrtrix-0.2.1.tar.bz2
cd mrtrix-0.2.1/
./build
2. Set appropriate environment variables:
Bash shell:
export PATH=/<edit as appropriate>/mrtrix-0.2.1/bin:$PATH
export LD_LIBRARY_PATH=/<edit as appropriate>/mrtrix-0.2.1/lib
C shell:
setenv PATH /<edit as appropriate>/mrtrix-0.2.1/bin:$PATH
setenv LD_LIBRARY_PATH /<edit as appropriate>/mrtrix-0.2.1/lib
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MRtrix provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density
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