plots.rules

rule plots:
    input:
        "plots/example_simplex_datasets.pdf",
        "plots/simplex_summary_plot.pdf",
        "plots/shrinkage.pdf",
        "plots/mean_shift.pdf",
        "plots/psm_vs_acc.pdf",
        "plots/psm_hist.pdf",

rule example_simplex:
    output:
        "plots/example_simplex_datasets.pdf",
    script:
        "scripts/plot_simplex_example.R"

rule simplex_plots:
    input:
        "simplex_results/full_results.csv",
    output:
        ari="plots/simplex_summary_plot.pdf",
        ari_nolatent="plots/simplex_summary_plot_nolatent.pdf",
        K_line="plots/simplex_summary_plot_K_line.pdf",
        K_hist="plots/simplex_summary_plot_K_hist.pdf",
    script:
        "scripts/plot_results.R"

rule shrinkage:
    output:
        "plots/clusterVar2_hist.pdf",
        "plots/shrinkage.pdf",
    shell:
        "Rscript scripts/cluster_var_shrinkage.R"

rule mean_shift:
    output:
        "plots/mean_shift.pdf",
    shell:
        "Rscript scripts/mean_shift.R"

rule psm_vs_accuracy:
    output:
        "plots/psm_vs_acc.pdf",
        "plots/psm_hist.pdf",
    shell:
        "Rscript scripts/psm_vs_accuracy.R"