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  • Palo Alto, CA

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pingcap/autoflow is a Graph RAG based and conversational knowledge base tool built with TiDB Serverless Vector Storage. Demo: https://tidb.ai

TypeScript 2,394 134 Updated Mar 3, 2025

Open source implementation of AlphaFold3

Python 967 84 Updated Oct 7, 2024

A comprehensive cancer DNA/RNA analysis and reporting pipeline

Nextflow 61 15 Updated Mar 3, 2025

AutoAWQ implements the AWQ algorithm for 4-bit quantization with a 2x speedup during inference. Documentation:

Python 1,979 249 Updated Jan 20, 2025

gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

Python 249 30 Updated Feb 26, 2025

A high-throughput and memory-efficient inference and serving engine for LLMs

Python 40,058 5,996 Updated Mar 3, 2025

The most no-nonsense, locally or API-hosted AI code completion plugin for Visual Studio Code - like GitHub Copilot but 100% free.

TypeScript 3,373 185 Updated Feb 15, 2025

Biological foundation modeling from molecular to genome scale

Jupyter Notebook 1,324 163 Updated Feb 26, 2025
Python 68 2 Updated Mar 22, 2024

InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.

Python 68 6 Updated Feb 7, 2025

A multi-backend implementation of the Keras API, with support for TensorFlow, JAX, and PyTorch.

Python 1,268 117 Updated Jul 25, 2024

🦜🔗 Build context-aware reasoning applications

Jupyter Notebook 102,105 16,559 Updated Mar 1, 2025

Point cloud diffusion for 3D model synthesis

Python 6,645 772 Updated Jul 4, 2024

A minimal PyTorch re-implementation of the OpenAI GPT (Generative Pretrained Transformer) training

Python 21,493 2,787 Updated Aug 15, 2024

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

Python 140,530 28,179 Updated Mar 3, 2025

A beautiful and useful prompt for your shell

Python 6,246 743 Updated Mar 19, 2024

Cloud-native genomic dataframes and batch computing

Python 997 248 Updated Mar 3, 2025

Embeddable genomic visualization component based on the Integrative Genomics Viewer

HTML 664 231 Updated Feb 25, 2025

a framework for training sequence-level deep learning networks

Jupyter Notebook 378 91 Updated Dec 16, 2024

A workflow for identifying viral integrations in both short and long read data

OpenEdge ABL 8 2 Updated Jul 16, 2024

A curated list of nextflow based pipelines

580 89 Updated Oct 27, 2022

Diffusion Bee is the easiest way to run Stable Diffusion locally on your M1 Mac. Comes with a one-click installer. No dependencies or technical knowledge needed.

JavaScript 13,053 656 Updated Oct 30, 2024

Fully automated homelab from empty disk to running services with a single command.

Python 8,448 787 Updated Jan 21, 2025

An analysis and visualization platform for 'omics data

Python 454 146 Updated Mar 3, 2025

Genomic software written in Go for researching stickleback genetics

Go 3 1 Updated May 23, 2022

A curated list of awesome open source libraries to deploy, monitor, version and scale your machine learning

18,137 2,305 Updated Mar 3, 2025

Declarative Continuous Deployment for Kubernetes

Go 18,814 5,766 Updated Mar 3, 2025

The Go kernel for Jupyter notebooks and nteract.

Go 3,894 261 Updated Nov 3, 2023

A simple, fast, and fun package for building command line apps in Go

Go 22,813 1,723 Updated Feb 24, 2025
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