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Commits on Feb 18, 2025

• fix: Calculate bold mask and dummy scans in transform-only runs (#3428)

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Commits on Feb 12, 2025

• rf: Use validation_and_dummies_wf in transform mode

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• rf: Factor out validation and dummy-scan detection from raw_boldref_wf

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• fix: Calculate bold mask from provided coreg ref

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• rf: Calculate RMSD from motion transforms (#3427)

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• Update fmriprep/interfaces/confounds.py

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Commits on Feb 10, 2025

• rf: Calculate RMSD from motion transforms

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• fix: Consistently use DataFrame.to_csv(..., na_rep='n/a')

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• test(rmsd): Verify reconstruction of FSL rmsd

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• test: Update test timeseries.tsv

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• feat: Add implementation of FSL RMS Deviation (rmsd)

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Commits on Feb 7, 2025

• rf: Reconstruct motion confounds from minimal derivatives (#3424)

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• test: Filter columns for FSLMotionParams test

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• fix: Preserve n/a during FD sum

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• test: Add test for FD interface

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Commits on Jan 30, 2025

• test: Verify motion parameter reconstruction

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• test: Add baseline motion parameters, transforms and ref

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• rf: Reconstruct motion confounds from minimal derivatives

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• feat: Add FramewiseDisplacement interface that expects headers

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• feat: Add FSLMotionParams interface to recover motion parameters

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• chore: Bump pins, update RTD config (#3425)

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Commits on Jan 29, 2025

• ci: Expect only one layer of coefficients for SyN

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• chore: Update readthedocs config

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• chore: pip compile

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• mnt: Update nipreps pins

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Commits on Jan 15, 2025

• chore(docker): Declare linux/amd64 platform during build (#3422)

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• chore(docker): Declare linux/amd64 platform during build

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• Upgrade to ruff 0.9.1 (#3421)

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Commits on Jan 14, 2025

• Run ruff format

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• Upgrade to ruff 0.9.1

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Commits on Jan 6, 2025

• fix: Use consistent skull-stripping pre- and post- SDC (#3415)

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Commits on Dec 23, 2024

• Chore(deps): Bump astral-sh/setup-uv from 4 to 5 (#3417)

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• Chore(deps): Bump astral-sh/setup-uv from 4 to 5

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Commits on Dec 19, 2024

• fix: Use consistent skull-stripping pre- and post- SDC

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• chore: Test support for Python 3.13 (#3416)

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