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Commits on Dec 9, 2024

• More robust conversion of chromosome numbers to int

  omerwe

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Commits on Nov 22, 2024

• explicitly convert chromosome and basepairs to int for df indices

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Commits on Jul 28, 2024

• Merge pull request #203 from mkanai/fix_finemapper_mk

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Commits on Jul 26, 2024

• fix rsid.rsid

  mkanai

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Commits on May 31, 2024

• update to newer pandas versions

  omerwe

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Commits on May 29, 2024

• update polypred to take a weighted sum of PRS instead of a weighted sum of betas, which loses accuracy for some reason we don't understand involving plink

  omerwe

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Commits on May 10, 2024

• Report R2 when estimating mixing weights

  omerwe

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Commits on May 9, 2024

• fix hadnling of non-human organisms

  omerwe

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Commits on May 5, 2024

• bug fix in support for organisms with a different number of chromosomes

  omerwe

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Commits on Mar 18, 2024

• add support for num chromosomes different from 22

  omerwe

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• Update splash screen year

  omerwe

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Commits on Mar 5, 2024

• Add clear error when HESS-estimated prior-var is >=1

  omerwe

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• update from_numpy_array to support networkx > 3.0

  omerwe

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Commits on Mar 3, 2024

• Merge pull request #183 from jdblischak/remove-lasso-arg-normalize

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Commits on Mar 1, 2024

• Remove arg normalize from Lasso() (no longer exists)

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  jdblischak

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Commits on Nov 14, 2023

• re-commit to fix timestamp

  omerwe

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Commits on Nov 12, 2023

• print failed commands

  omerwe

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Commits on Aug 1, 2023

• Merge pull request #166 from jdblischak/setup-micromamba

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  omerwe

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Commits on Jul 31, 2023

• Migrate to mamba-org/setup-micromamba@v1

  jdblischak

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Commits on Jul 29, 2023

• bug fix (duplicate not)

  omerwe

  committed
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Commits on Jul 22, 2023

• PolyLoc no longer requires --bfile-chr

  omerwe

  committed
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• Merge branch 'master' of https://github.com/omerwe/polyfun

  omerwe

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• no need for fam files in polyloc stages 1,3

  omerwe

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Commits on Apr 25, 2023

• Merge pull request #156 from jdblischak/loosen-rpy2-pin

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Commits on Apr 24, 2023

• Loosen rpy2 pin

  jdblischak

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Commits on Apr 21, 2023

• Merge branch 'master' of https://github.com/omerwe/polyfun

  omerwe

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• update regions file to point to new LD files path

  omerwe

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Commits on Apr 16, 2023

• Update README.md

  omerwe

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• Merge pull request #154 from jdblischak/lockfile

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  omerwe

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Commits on Apr 14, 2023

• Create lockfile for conda environment

  jdblischak

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• Update README.md

  omerwe

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Commits on Mar 24, 2023

• Merge pull request #151 from jdblischak/github-actions

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  omerwe

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• Merge pull request #150 from jdblischak/susie-bhat

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  omerwe

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Commits on Mar 23, 2023

• Install and test FINEMAP

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  jdblischak

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• Run tests with GitHub Actions

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