SlicerMorph Tutorials

These tutorials show how to use SlicerMorph (and other relevant Slicer) modules in digital morphology and morphometrics related tasks.

Tutorial descriptions

1. SlicerMorph preferences: Explains what customizations can be done to Slicer as well as how to set download directory

2. Sample Data: Shows how to use the Slicer's Sample Data module to download and access sample data to be used in tutorials

3. ImageStacks: Tutorial on how to import non-DICOM imagestacks easily into Slicer.

4. SkyscanReconImport: Module specific to importing output from Bruker/Skyscan MicroCT

5. Markups-I: Introduction markup types, UI, settings:

6. Markups-II: Resampling Semi-landmarks on curves

7. Patch-based Semi-Landmarking tutorial:

8. Generating a template of Pseudo-landmarks:

9. MarkupsEditor:

10. MergeMarkups:

11. ALPACA:

12. GPA-I: Basics of GPA

13. GPA-II: 3D interactive visualization and exporting animations

14. GPA-III: Exporting data/results for R

15. Auto3Dgm

16. Animator