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Copy pathSraRunTable.txt
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SraRunTable.txt
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Run,Assay Type,AvgSpotLen,Bases,BioProject,BioSample,Bytes,Center Name,Consent,DATASTORE filetype,DATASTORE provider,DATASTORE region,Experiment,GEO_Accession,Instrument,Library Name,LibraryLayout,LibrarySelection,LibrarySource,MBases,MBytes,Organism,Platform,ReleaseDate,sample_acc,Sample Name,source_name,SRA Study,tissue,transfection
SRR493368,RNA-Seq,202,4409750698,PRJNA162905,SAMN00990706,3037074781,GEO,public,sra,"gs,s3,ncbi","ncbi.public,gs.US,s3.us-east-1",SRX145664,GSM925764,Illumina HiSeq 2000,GSM925764: LFB_scramble_hiseq_repC,PAIRED,cDNA,TRANSCRIPTOMIC,4409,2896,Homo sapiens,ILLUMINA,2012-12-11T00:00:00Z,SRS311911,GSM925764,LFB_scramble_hiseq_repC,SRP012607,lung fibroblasts,Scramble siRNA
SRR493366,RNA-Seq,202,3053802266,PRJNA162905,SAMN00990704,2053026754,GEO,public,sra,"ncbi,s3,gs","gs.US,ncbi.public,s3.us-east-1",SRX145662,GSM925762,Illumina HiSeq 2000,GSM925762: LFB_scramble_hiseq_repA,PAIRED,cDNA,TRANSCRIPTOMIC,3053,1957,Homo sapiens,ILLUMINA,2012-12-11T00:00:00Z,SRS311909,GSM925762,LFB_scramble_hiseq_repA,SRP012607,lung fibroblasts,Scramble siRNA
SRR493367,RNA-Seq,202,3521601744,PRJNA162905,SAMN00990705,2461103215,GEO,public,sra,"s3,gs,ncbi","ncbi.public,s3.us-east-1,gs.US",SRX145663,GSM925763,Illumina HiSeq 2000,GSM925763: LFB_scramble_hiseq_repB,PAIRED,cDNA,TRANSCRIPTOMIC,3521,2347,Homo sapiens,ILLUMINA,2012-12-11T00:00:00Z,SRS311910,GSM925763,LFB_scramble_hiseq_repB,SRP012607,lung fibroblasts,Scramble siRNA
SRR493370,RNA-Seq,202,4068646226,PRJNA162905,SAMN00990708,2848587812,GEO,public,sra,"s3,gs,ncbi","ncbi.public,s3.us-east-1,gs.US",SRX145666,GSM925766,Illumina HiSeq 2000,GSM925766: LFB_HOXA1KD_hiseq_repB,PAIRED,cDNA,TRANSCRIPTOMIC,4068,2716,Homo sapiens,ILLUMINA,2012-12-11T00:00:00Z,SRS311913,GSM925766,LFB_HOXA1KD_hiseq_repB,SRP012607,lung fibroblasts,HOXA1 knockdown
SRR493369,RNA-Seq,202,3619052604,PRJNA162905,SAMN00990707,2439090038,GEO,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX145665,GSM925765,Illumina HiSeq 2000,GSM925765: LFB_HOXA1KD_hiseq_repA,PAIRED,cDNA,TRANSCRIPTOMIC,3619,2326,Homo sapiens,ILLUMINA,2012-12-11T00:00:00Z,SRS311912,GSM925765,LFB_HOXA1KD_hiseq_repA,SRP012607,lung fibroblasts,HOXA1 knockdown
SRR493371,RNA-Seq,202,4755918906,PRJNA162905,SAMN00990709,3284337725,GEO,public,sra,"gs,ncbi,s3","gs.US,ncbi.public,s3.us-east-1",SRX145667,GSM925767,Illumina HiSeq 2000,GSM925767: LFB_HOXA1KD_hiseq_repC,PAIRED,cDNA,TRANSCRIPTOMIC,4755,3132,Homo sapiens,ILLUMINA,2012-12-11T00:00:00Z,SRS311914,GSM925767,LFB_HOXA1KD_hiseq_repC,SRP012607,lung fibroblasts,HOXA1 knockdown