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Issues list

[odgi::extract] error: no path to fully retain.
#461 by ld9866 was closed Nov 28, 2022
odgi inject with overlapping bed entries
#475 by henrivkgt was closed Feb 15, 2023
11
Inconsistent matrix generation in odgi paths
#484 by sivico26 was closed Mar 14, 2023
5
Interpreting output from heaps_fit.R
#503 by mb47 was closed May 25, 2023
8
hifiasm GFA to OG
#504 by jiadong324 was closed Jun 25, 2023
2
odgi heaps for subsets of samples
#505 by mb47 was closed Jun 14, 2023
4
odgi compilation error
#506 by subwaystation was closed Jun 25, 2023
1
odgi similarity segfault with multiple threads
#519 by ASLeonard was closed Jul 14, 2023
1
9
question on discrepancy between 1D and 2D visualization
#524 by jyj5558 was closed Aug 15, 2023
2
Issue with compacting path names using odgi -viz
#527 by gavinieong was closed Sep 8, 2023
4
order of species in odgi viz
#530 by isabelladistefano was closed Sep 18, 2024
1
Is there a recommended way to generate phylogenetic tree
#540 by zhangting1991 was closed Feb 6, 2024
1
odgi viz, display for whole chromosomes
#542 by Rktf was closed Jan 12, 2024
2
Depth question
#545 by jonahcullen was closed Jan 11, 2024
3
odgi build cannot process HPRC minigraph gfa
#546 by adadiehl was closed Jan 18, 2024
3
How to get the Minigraph-Cactus path in odgi
#550 by ld9866 was closed Jan 23, 2024
HPRC graph conversion issues
#551 by adadiehl was closed Mar 5, 2024
7
Odgi squeeze doesn't recognize my GFAv1 files
#560 by MarionPerrier was closed Feb 21, 2024
2
bed file
#561 by ZiliaMR was closed Sep 18, 2024
3
converting gfa from flye assembler fails with docker odgi
#562 by splaisan was closed Mar 13, 2024
4
odgi layout - sorting and node id order
#567 by ScottMastro was closed Apr 2, 2024
2
Odgi viz: visualize haplotypes
#575 by SimonaSecomandi was closed Jun 4, 2024
1
Segmentation fault (core dumped) when odgi extract
#576 by yeeus was closed Jun 19, 2024
1
odgi heaps
#579 by jwli-code was closed Jul 9, 2024
1
'odgi sort -O' may change Node ID ?
#580 by zhangyixing3 was closed Jul 5, 2024
1
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