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Include drug resistances from PointFinder in StarAMR report #165

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apetkau opened this issue Dec 21, 2022 · 1 comment

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duplicate enhancement

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apetkau commented Dec 21, 2022

We should include the drug resistances from the PointFinder database in the StarAMR reports. For example, the values in the Resistance column here: https://bitbucket.org/genomicepidemiology/pointfinder_db/src/master/escherichia_coli/resistens-overview.txt

These should be included as another column in the StarAMR output and not replace the existing custom-developed drug-resistance values

apetkau added the enhancement label

apetkau added the duplicate label

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apetkau commented Aug 3, 2023

Duplicate of #170

apetkau marked this as a duplicate of #170

apetkau closed this as not planned

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