Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

np.unicode_ was removed in the NumPy 2.0 release #213

Closed
sgsutcliffe opened this issue Jul 15, 2024 · 2 comments
Closed

np.unicode_ was removed in the NumPy 2.0 release #213

sgsutcliffe opened this issue Jul 15, 2024 · 2 comments

Comments

@sgsutcliffe
Copy link
Collaborator

We need to replace np.unicode_ with np.str_ in line

dtype={'qseqid': np.unicode_, 'sseqid': np.unicode_})

In the BlastResultsParser.py script to be compatible with 2.0+ Numpy

@cizydorczyk
Copy link

I had to manually edit this line as stated above to make staramr run. I have python 3.12.5 and numpy 2.1.0 installed. Staramr 0.10.0.

@apetkau
Copy link
Member

apetkau commented Dec 16, 2024

Fixed in #217

@apetkau apetkau closed this as completed Dec 16, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

3 participants