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0.7.inc
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.. _changes_0_7:
Version 0.7 (2013-11-26)
------------------------
Changelog
~~~~~~~~~
- Add capability for real-time feedback via trigger codes using StimServer and StimClient classes by `Mainak Jas`_
- New decoding module for MEG analysis containing sklearn compatible transformers by `Mainak Jas`_ and `Alex Gramfort`_
- New realtime module containing RtEpochs, RtClient and MockRtClient class by `Martin Luessi`_, `Christopher Dinh`_, `Alex Gramfort`_, `Denis Engemann`_ and `Mainak Jas`_
- Allow picking normal orientation in LCMV beamformers by `Roman Goj`_, `Alex Gramfort`_, `Denis Engemann`_ and `Martin Luessi`_
- Add printing summary to terminal for measurement info by `Denis Engemann`_
- Add read and write info attribute ICA objects by `Denis Engemann`_
- Decoding with Common Spatial Patterns (CSP) by `Romain Trachel`_ and `Alex Gramfort`_
- Add ICA ``plot_topomap`` function and method for displaying the spatial sensitivity of ICA sources by `Denis Engemann`_
- Plotting multiple brain views at once by `Eric Larson`_
- Reading head positions from raw FIFF files by `Eric Larson`_
- Add decimation parameter to ICA.decompose* methods by `Denis Engemann`_ and `Alex Gramfort`_
- Add rejection buffer to ICA.decompose* methods by `Denis Engemann`_ and `Alex Gramfort`_
- Improve ICA computation speed and memory usage by `Denis Engemann`_ and `Alex Gramfort`_
- Add polygonal surface decimation function to preprocess head surfaces for coregistration by `Denis Engemann`_ and `Alex Gramfort`_
- DICS time-frequency beamforming for epochs, evoked and for estimating source power by `Roman Goj`_, `Alex Gramfort`_ and `Denis Engemann`_
- Add method for computing cross-spectral density (CSD) from epochs and class for storing CSD data by `Roman Goj`_, `Alex Gramfort`_ and `Denis Engemann`_
- Add trellis plot function and method for visualizing single epochs by `Denis Engemann`_
- Add fiducials read/write support by `Christian Brodbeck`_ and `Alex Gramfort`_
- Add select / drop bad channels in ``plot_raw`` on click by `Denis Engemann`_
- Add ``ico`` and ``oct`` source space creation in native Python by `Eric Larson`_
- Add interactive rejection of bad trials in ``plot_epochs`` by `Denis Engemann`_
- Add morph map calculation by `Eric Larson`_ and `Martin Luessi`_
- Add volume and discrete source space creation and I/O support by `Eric Larson`_
- Time-frequency beamforming to obtain spectrograms in source space using LCMV and DICS by `Roman Goj`_, `Alex Gramfort`_ and `Denis Engemann`_
- Compute epochs power spectral density function by `Denis Engemann`_
- Plot raw power spectral density by `Eric Larson`_
- Computing of distances along the cortical surface by `Eric Larson`_
- Add reading BEM solutions by `Eric Larson`_
- Add forward solution calculation in native Python by `Eric Larson`_
- Add (Neuro)debian license compatibility by `Eric Larson`_
- Automatic QRS threshold selection for ECG events by `Eric Larson`_
- Add Travis continuous integration service by `Denis Engemann`_
- Add SPM face data set by `Denis Engemann`_ `Martin Luessi`_ and `Alex Gramfort`_
- Support reading of EDF+,BDF data by `Teon Brooks`_
- Tools for scaling MRIs (mne.scale_mri) by `Christian Brodbeck`_
- GUI for head-MRI coregistration (mne.gui.coregistration) by `Christian Brodbeck`_
- GUI for ki2fiff conversion (mne.gui.kit2fiff) by `Christian Brodbeck`_
- Support reading of EEG BrainVision data by `Teon Brooks`_
- Improve CTF compensation handling by `Martin Luessi`_ and `Eric Larson`_
- Improve and extend automated layout guessing by `Denis Engemann`_
- Add Continuum Analytics Anaconda support by `Denis Engemann`_
- Add ``subtract evoked`` option to beamformers by `Andrew Dykstra`_
- Add new ``transform`` method to SourceEstimate(s) by `Andrew Dykstra`_
API
~~~
- The pick_normal parameter for minimum norm solvers has been renamed as ``pick_ori`` and normal orientation picking is now achieved by passing the value "normal" for the ``pick_ori`` parameter.
- ICA objects now expose the measurement info of the object fitted.
- Average EEG reference is now added by default to Raw instances.
- Removed deprecated read/write_stc/w, use SourceEstimate methods instead
- The ``chs`` argument in ``mne.layouts.find_layout`` is deprecated and will be removed in MNE-Python 0.9. Use ``info`` instead.
- ``plot_evoked`` and ``Epochs.plot`` now open a new figure by default. To plot on an existing figure please specify the ``axes`` parameter.
Authors
~~~~~~~
The committer list for this release is the following (preceded by number
of commits):
* 336 Denis A. Engemann
* 202 Eric Larson
* 193 Roman Goj
* 138 Alexandre Gramfort
* 99 Mainak Jas
* 75 Christian Brodbeck
* 60 Martin Luessi
* 40 Teon Brooks
* 29 Romain Trachel
* 28 Andrew Dykstra
* 12 Mark Wronkiewicz
* 10 Christoph Dinh
* 8 Alan Leggitt
* 3 Yaroslav Halchenko
* 3 Daniel Strohmeier
* 2 Mads Jensen
* 2 Praveen Sripad
* 1 Luke Bloy
* 1 Emanuele Olivetti
* 1 Yousra BEKHTI