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Commits on Oct 20, 2023

• Merge pull request NBISweden#291 from NBISweden/257-fix-macro-identifiers

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  kusalananda

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• Fix header guard names

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  kusalananda

  committed
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Commits on Oct 19, 2023

• Merge pull request NBISweden#286 from NBISweden/fix/smarter-disabling

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  kusalananda

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• Merge pull request NBISweden#287 from NBISweden/feature/header-minor

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  kusalananda

  authored
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• very minor formatting changes

  zhangchicool

  committed
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• changed year end to 2023

  zhangchicool

  committed
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Commits on Oct 3, 2023

• Update INSTALL text regarding recent SIMD changes

  kusalananda

  committed
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Commits on Sep 29, 2023

• regen

  kusalananda

  committed
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• Use the AX_EXT macro for testing, but not for setting the compiler flags

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  kusalananda

  committed
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• Better logic for enabling the vector extensions

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  kusalananda

  committed
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• Merge pull request NBISweden#285 from ronquist/checkpoint-fix

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  kusalananda

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Commits on Sep 27, 2023

• Fixed issue with checkpointing when root age is calibrated; clock rate and root age now checked against each other just before the chain starts.

  ronquist

  committed
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Commits on Jun 28, 2023

• updated NEWS

  zhangchicool

  committed
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• minor check

  zhangchicool

  committed
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Commits on Jun 25, 2023

• refactored fbd prior calculation

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  zhangchicool

  committed
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Commits on May 24, 2023

• updated help messages for fbd related parameters

  zhangchicool

  committed
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Commits on Apr 21, 2023

• fixed setting popsizepr and growthpr for protein data

  zhangchicool

  committed
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• a few more fixes, which are:

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  zhangchicool

  committed
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Commits on Apr 3, 2023

• silenced several compiler warnings

  zhangchicool

  committed
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Commits on Mar 27, 2023

• brought the changes and fixes from a local branch

  zhangchicool

  committed
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• extended the coalescent prior to support serially-sampled tips (NBISweden#270)

  zhangchicool

  authored
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Commits on Mar 29, 2022

• corrected standard state code for more than 10 states

  zhangchicool

  committed
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Commits on Nov 18, 2021

• Merge branch 'develop' of github.com:NBISweden/MrBayes into develop

  zhangchicool

  committed
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• fixed a bug introduced in commit ea2712e by reverting the changes to calibrationPtr->min

  zhangchicool

  committed
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Commits on Nov 1, 2021

• Make sure that the correct beagle-lib tag is checked out

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  kusalananda

  committed
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Commits on Jul 9, 2021

• changed some default tuning values

  zhangchicool

  committed
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Commits on Jul 7, 2021

• adjusted bounds of tuning parameters in the moves

  zhangchicool

  committed
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Commits on Jul 4, 2021

• Autotune feature for the rjMCMC clock models (NBISweden#251)

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  zhangchicool

  authored
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Commits on Jun 28, 2021

• fixed bug in the prior distribution in ILN clock model, see NBISweden#250

  zhangchicool

  committed
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Commits on May 11, 2021

• match the style of the other functions

  zhangchicool

  committed
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Commits on May 8, 2021

• silenced a warning of old-style function definition

  zhangchicool

  committed
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Commits on May 6, 2021

• Do not try to adjust Beagle-related things if Beagle is not available

  kusalananda

  committed
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Commits on Mar 31, 2021

• updated proposal weights, again

  zhangchicool

  committed
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Commits on Mar 30, 2021

• removed two unnecessary checkings

  zhangchicool

  committed
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Commits on Mar 12, 2021

• updated a few proposal weights

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  zhangchicool

  committed
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