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Commits on May 31, 2024

• Exclude suggestRepeat and suggestBubble contigs

  rrwick

  committed
  77d1be8

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Commits on Mar 28, 2024

• Bump version

  rrwick

  committed
  964daee

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Commits on Oct 20, 2023

• Attempt all circularisations before quitting with an error

  rrwick

  committed
  52b8c1f

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Commits on Aug 10, 2023

• Error when genome size assembly fails

  rrwick

  committed
  ade516e

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Commits on Aug 8, 2023

• Print pairwise results in order

  rrwick

  committed
  d987636

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• Merge pull request #64 from danpal96/main

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  rrwick

  authored
  ef1cc99

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Commits on Aug 2, 2023

• Parallelization of get_pairwise_alignments

  

  Daniel Esteban Palma Igor

  committed
  1b99dd8

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Commits on Aug 1, 2023

• Fix argument types

  rrwick

  committed
  aa40d3f

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Commits on Apr 5, 2023

• Fix Pillow deprecation warning

  rrwick

  committed
  c00d56f

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• Fix parsing of R package versions

  rrwick

  committed
  ee60e93

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Commits on Mar 15, 2023

• Bump version

  rrwick

  committed
  9073d03

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Commits on Mar 13, 2023

• Use scheduler's CPU count when possible

  rrwick

  committed
  c084ad9

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Commits on Dec 4, 2022

• Replace max-indel with worst-1kbp identity

  rrwick

  committed
  6d86509

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Commits on Nov 29, 2022

• Fix typo

  rrwick

  committed
  392f5bd

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Commits on Oct 21, 2022

• Fix bug with starting seq coverage

  rrwick

  committed
  9da386d

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Commits on Oct 11, 2022

• Fixes for Muscle v5

  rrwick

  committed
  886fdd5

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Commits on Jun 14, 2022

• Add Canu contig trimming script

  rrwick

  committed
  399d7d4

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Commits on May 30, 2022

• Add coverage.py configuration file

  rrwick

  committed
  863968b

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• Check for empty MUSCLE files

  rrwick

  committed
  42be6d7

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Commits on Dec 9, 2021

• Fix version number

  rrwick

  committed
  9cc62a5

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Commits on Nov 19, 2021

• Update to work with MUSCLE v5

  rrwick

  committed
  8e475a8

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• Parse version from MUSCLE v5

  rrwick

  committed
  87953f2

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Commits on Nov 5, 2021

• Add citation file

  rrwick

  committed
  b9306e6

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Commits on Oct 28, 2021

• Add more fonts to try

  rrwick

  committed
  f17018b

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• Fix bug when falling back to default font

  rrwick

  committed
  e935f66

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Commits on Oct 18, 2021

• Update paper link

  rrwick

  committed
  5e9dce6

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Commits on Oct 11, 2021

• Bump version

  rrwick

  committed
  cf4bb28

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Commits on Sep 28, 2021

• Change PIL to pillow

  rrwick

  committed
  7d3aba2

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• Fix Rscript path

  rrwick

  committed
  ae58eed

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• Add test for tree building

  rrwick

  committed
  7a4dc87

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Commits on Sep 16, 2021

• Increase default for --max_indel_size from 250 to 1000

  rrwick

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Commits on Jul 26, 2021

• Add white background logo

  rrwick

  committed
  98cc481

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• Transparent logo appropriate for light/dark themes

  rrwick

  committed
  c17dc2e

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Commits on Jul 5, 2021

• Fix typo in paper link

  rrwick

  committed
  0022b4d

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• Add link to paper

  rrwick

  committed
  eb08d23

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