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Commits on Oct 30, 2023

• Add https://github.com/DominikSzabo1/Meltron

  mdozmorov

  committed
  92936b7

Commits on Oct 26, 2023

• Add https://github.com/lyotvincent/HiBrowser

  mdozmorov

  committed
  537b254

Commits on Oct 24, 2023

• Add Review of computational tools for 3D genome analysis https://doi.org/10.1093/bib/bbad302

  mdozmorov

  committed
  a1850e2

Commits on Oct 13, 2023

• Add GAGE-seq https://doi.org/10.1101/2023.07.20.549578

  mdozmorov

  committed
  1baab79

Commits on Oct 7, 2023

• Add CScoreTool https://github.com/scoutzxb/CscoreTool

  mdozmorov

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  8ca13a5

• Add Review of computational methods for 3D genome analysis https://doi.org/10.1038/s41576-023-00638-1

  mdozmorov

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  9f431ef

Commits on Oct 5, 2023

• Add https://github.com/zhanglabtools/CIRCLET

  mdozmorov

  committed
  3ab4e89

Commits on Sep 26, 2023

• Add https://github.com/lhqxinghun/TADfit

  mdozmorov

  committed
  0981c2f

Commits on Sep 4, 2023

• Add https://github.com/Roy-lab/tgif

  mdozmorov

  committed
  09c6454

Commits on Sep 2, 2023

• Add https://github.com/CSOgroup/CALDER

  mdozmorov

  committed
  669b0d6

Commits on Aug 27, 2023

• Add https://github.com/lihan97/sslHiC

  mdozmorov

  committed
  f8e0c63

Commits on Aug 8, 2023

• Add https://github.com/agalitsyna/fontanka

  mdozmorov

  committed
  938a573

Commits on Aug 4, 2023

• Add https://github.com/EricSDavis/dietJuicer

  mdozmorov

  committed
  64939ef

Commits on Jul 20, 2023

• Add 4DN review, https://doi.org/10.1016/j.molcel.2023.06.018

  mdozmorov

  committed
  7b1a2cf

Commits on Jul 9, 2023

• Add Tri-C technology paper https://doi.org/10.1038/s41588-018-0253-2

  mdozmorov

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  e511a0c

Commits on Jul 3, 2023

• Update https://bioconductor.org/packages/Chicago/

  mdozmorov

  committed
  1052306

Commits on Jul 2, 2023

• Update http://www.bioinformatics.babraham.ac.uk/projects/hicup/

  mdozmorov

  committed
  f4a009b

• Add Promoter Capture Hi-C https://www.jove.com/video/57320

  mdozmorov

  committed
  6e7edae

Commits on Jun 28, 2023

• Add Multiplex-GAM technology, https://github.com/pombo-lab/multiplex-gam-2023

  mdozmorov

  committed
  b7bb1f4

Commits on Jun 27, 2023

• Add https://github.com/LaureTomas/HiCaptuRe/

  mdozmorov

  committed
  355c159

Commits on Jun 26, 2023

• Update https://github.com/JavierreLab/liCHiC paper

  mdozmorov

  committed
  15dbbaf

Commits on Jun 12, 2023

• Fix license

  mdozmorov

  committed
  495ba66

Commits on Jun 1, 2023

• Add Benchmarking of 11 methods for Hi-C map comparisons https://www.biorxiv.org/content/10.1101/2023.04.04.535480v1

  mdozmorov

  committed
  d048806

Commits on May 31, 2023

• Add Benchmarking of three genome assemblers https://doi.org/10.1101/2023.05.16.540917

  mdozmorov

  committed
  76b6ed8

Commits on May 25, 2023

• Add Benchmarking of Capture Hi-C Analytical Pipelines https://doi.org/10.3389/fgene.2022.786501

  mdozmorov

  committed
  ae41ad2

Commits on May 1, 2023

• Add https://paintshop.io/

  mdozmorov

  committed
  e8cb93f

Commits on Apr 20, 2023

• Add imaging technology review https://doi.org/10.1016/j.celrep.2023.112361

  mdozmorov

  committed
  5ebea6a

Commits on Apr 11, 2023

• Add http://phanstiel-lab.med.unc.edu/poweraid/

  mdozmorov

  committed
  fae1a33

Commits on Apr 9, 2023

• Add NOMe-seq technology paper, https://doi.org/10.1101/2022.03.29.486102

  mdozmorov

  committed
  15decdb

Commits on Apr 5, 2023

• Add Micro-Capture-C (MCC) technology, wet-lab and computational protocols https://doi.org/10.1038/s41596-023-00817-8

  mdozmorov

  committed
  424e548

Commits on Apr 4, 2023

• Add Review of chromatin loop calling tools https://doi.org/10.1093/bib/bbad072

  mdozmorov

  committed
  58cb57c

Commits on Apr 2, 2023

• Add https://github.com/wmalab/HiCube

  mdozmorov

  committed
  9dbb403

Commits on Mar 2, 2023

• Add https://github.com/open2c/pairtools/ preprint

  mdozmorov

  committed
  d359372

Commits on Feb 27, 2023

• Add https://github.com/victorykobets/HiConfidence

  mdozmorov

  committed
  29c4ce1

Commits on Feb 7, 2023

• Add https://github.com/js2264/HiCExperiment

  mdozmorov

  committed
  d0b7140

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