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Commits on Jul 30, 2017

• Merge pull request lh3#96 from jpfeil/master

  Show description for 31bf49d
  lh3

  authored
  31bf49d

• Merge pull request lh3#123 from bwlang/patch-1

  Show description for 4989736
  lh3

  authored
  4989736

• Merge pull request lh3#141 from jmarshall/bwasw-nan

  Show description for 87ed015
  lh3

  authored
  87ed015

Commits on Jul 3, 2017

• In bsw2_stat(), fail to infer when no pairs are within boundaries

  Show description for bcb475c
  jmarshall

  committed
  bcb475c

Commits on Jun 8, 2017

• Merge branch 'dev'

  lh3

  committed
  05c5013

• r1144: output debugging message to stderr

  lh3

  committed
  298284d

Commits on Apr 27, 2017

• updates grch38 URL

  Show description for 6442d00
  bwlang

  authored
  6442d00

Commits on Nov 9, 2016

• Add -M option to bwakit

  jpfeil

  committed
  9dfb970

Commits on May 31, 2016

• Merge branch 'dev'

  lh3

  committed
  5961611

• r1142: added option -5 for Hi-C data

  lh3

  committed
  f123871

• Merge branch 'dev'

  lh3

  committed
  0876421

• Release bwa-0.7.15-r1140

  lh3

  committed
  850dd81

Commits on May 20, 2016

• Merge branch 'dev'

  lh3

  committed
  bdfb9ef

• r1138: fixed typo in insert size estimate (lh3#65)

  Show description for 58bcc25
  lh3

  committed
  58bcc25

Commits on May 4, 2016

• Merge branch 'dev'

  lh3

  committed
  ee730f3

• Release 0.7.14-r1136

  lh3

  committed
  5db0c36

Commits on May 3, 2016

• Merge branch 'dev'

  lh3

  committed
  fe545f6

• r1134: use AH:* instead of AH:Y

  lh3

  committed
  7ec3261

Commits on Apr 28, 2016

• Merge branch 'master' of github.com:lh3/bwa

  lh3

  committed
  6b9be61

• Merge branch 'dev'

  lh3

  committed
  d668311

• r1130: changed "ah" to "AH"

  lh3

  committed
  3c03825

Commits on Mar 17, 2016

• Merge pull request lh3#55 from jdagilliland/master

  Show description for bb7533e
  lh3

  committed
  bb7533e

• Minor doc fix

  Show description for 6460ef5
  jdagilliland

  committed
  6460ef5

Commits on Mar 16, 2016

• option to skip ALT

  lh3

  committed
  2c078eb

Commits on Feb 23, 2016

• Merge branch 'dev'

  lh3

  committed
  8366203

• Released bwa-0.7.13 (r1126)

  lh3

  committed
  9e5852c

• Merge branch 'dev'

  lh3

  committed
  67aa1ca

• use /usr/env/perl

  lh3

  committed
  b94a78a

• added comment

  lh3

  committed
  f1ce529

• Port lh3#48 to the dev branch

  lh3

  committed
  11437a1

• Merge branch 'master' of github.com:lh3/bwa

  lh3

  committed
  5ecdc66

• Merge pull request lh3#48 from srl147/master

  Show description for f9a7869
  lh3

  committed
  f9a7869

• Merge branch 'dev'

  lh3

  committed
  4820d8f

Commits on Feb 13, 2016

• moved indexing to libbwa

  lh3

  committed
  9a82834

Commits on Feb 11, 2016

• fix assertion failure report on bio-bwa-help mailing list

  Show description for 099c24f
  srl147

  committed
  099c24f

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