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Thoroughly Caffeinated
Thoroughly Caffeinated

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@GordonLab @ClinDesk @TheMITTech @BradnerLab @mit @Chaudhuri-Lab @mcwdsi

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Showing results

Developer environments you can take with you

Rust 2,787 66 Updated Dec 18, 2024

Direct estimation of mean and covariance from single cell RNA seq experiments

Jupyter Notebook 87 7 Updated Dec 13, 2024

Python package to perform enrichment analysis from omics data.

Python 173 25 Updated Dec 3, 2024

A cross-platform java application for decoding, monitoring, recording and streaming trunked mobile and related radio protocols using Software Defined Radios (SDR). Website:

Java 1,630 260 Updated Dec 13, 2024

Survival analysis in Python

Python 2,388 560 Updated Oct 29, 2024

uBO Lite home (MV3)

JavaScript 1,251 53 Updated Dec 15, 2024

Convert methylation data to sparse objects for machine learning.

Python 1 Updated Dec 6, 2024

ConoDL is a sequence-based deep learning framework designed for the rapid and large-scale generation and screening of artificial conotoxins, including the conotoxin generation model, ConoGen, and t…

Python 2 Updated Mar 5, 2024

The Swiss Army knife for 802.11, BLE, HID, CAN-bus, IPv4 and IPv6 networks reconnaissance and MITM attacks.

JavaScript 16,924 1,484 Updated Nov 23, 2024

Download all the wallpapers in MKBHD's "Panels" app

Python 3,655 442 Updated Sep 25, 2024

Connect IDEMIA biometric readers to Home Assistant.

Go 2 Updated Sep 15, 2024

SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data

Jupyter Notebook 151 27 Updated Jun 28, 2024

Open source implementation of AlphaFold3

Python 940 83 Updated Oct 7, 2024
Jupyter Notebook 57 8 Updated Jun 17, 2021

Solve puzzles. Improve your pytorch.

Jupyter Notebook 3,328 290 Updated Jul 15, 2024

🍊 📊 💡 Orange: Interactive data analysis

Python 4,915 1,027 Updated Dec 16, 2024
Jupyter Notebook 40 6 Updated Oct 30, 2024

A modern model graph visualizer and debugger

JavaScript 1,081 89 Updated Dec 17, 2024

Pathformer: biological pathway informed transformer model

Python 26 6 Updated Dec 27, 2023

TimesFM (Time Series Foundation Model) is a pretrained time-series foundation model developed by Google Research for time-series forecasting.

Python 3,884 332 Updated Dec 12, 2024

weather.gov 2.0

JavaScript 333 10 Updated Dec 19, 2024

Efficient Differential Expression and Gene Aggregation for CRISPR screens.

Rust 6 Updated Dec 9, 2024

Biological foundation modeling from molecular to genome scale

Jupyter Notebook 1,194 148 Updated Dec 18, 2024
R 103 21 Updated Feb 11, 2024

Project that allows one to use a microphone with OpenAI whisper.

Python 725 160 Updated Jul 4, 2024

Implement a ChatGPT-like LLM in PyTorch from scratch, step by step

Jupyter Notebook 35,539 4,406 Updated Nov 18, 2024

Electronic Health Record Analysis with Python.

Python 244 20 Updated Dec 18, 2024
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