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7 stars written in C
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A versatile pairwise aligner for genomic and spliced nucleotide sequences

C 1,841 424 Updated Nov 18, 2024

SRA Tools

C 1,155 251 Updated Dec 27, 2024

lumpy: a general probabilistic framework for structural variant discovery

C 317 119 Updated Jun 7, 2022

Detecting sites of genomic enrichment

C 189 27 Updated May 8, 2023

BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy visualization of commonly used DNA-seq capture based methods.

C 67 17 Updated Dec 4, 2024

Deconvolution of widefield microscopy images and generation of point spread functions

C 43 2 Updated Jan 2, 2025

A GTK3 GUI for deconwolf

C 7 Updated Nov 6, 2024