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Commits on May 5, 2021

• Fixed gtfComp parameter type (redo)

  hyunminkang

  committed
  da70fc7

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• Fixed gtfComp parameter type (redo)

  hyunminkang

  committed
  6eca157

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Commits on Apr 13, 2021

• Merge pull request #43 from Puriney/master

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  Griffan

  authored
  4b6a88a

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• fix blanks

  Puriney

  committed
  3c34731

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• htslib needs git submodule

  Puriney

  committed
  7199427

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Commits on Dec 14, 2020

• Fixed compilation warnings and htslib-1.11 compatibility issue

  hyunminkang

  committed
  3e4a38b

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Commits on Jun 16, 2020

• Updated dsc-pileup, added dsc-dump, dsc-dump2plp

  hyunminkang

  committed
  fad4392

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• Reverted recent changes that caused segfaults

  hyunminkang

  committed
  280f864

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Commits on Jun 15, 2020

• Resolved compilation errors with new htslib

  hyunminkang

  committed
  6f1e221

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Commits on Mar 2, 2020

• Modified CMakeList.txt for cget compatibility

  hyunminkang

  committed
  0380446

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Commits on Dec 12, 2019

• Added a short note on the ATAC application of demuxlet.

  

  antonogorodnikov

  committed
  6798538

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• Added a short note on the ATAC application of demuxlet.

  

  antonogorodnikov

  committed
  07e6a6b

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• Added a short note on the ATAC application of demuxlet.

  

  antonogorodnikov

  committed
  cc5e112

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Commits on Nov 4, 2019

• Fixed paragraph describing usage of demuxlet without dsc-pileup

  

  antonogorodnikov

  committed
  f1d2caf

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Commits on Oct 29, 2019

• Merge pull request #20 from yelabucsf/master

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  hyunminkang

  authored
  5b12021

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• Added recommendations for vcf filtering and YeLab SNP sites for scRNAseq

  

  antonogorodnikov

  committed
  dd24fe4

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Commits on Oct 28, 2019

• 1. Resolve hts_pos_t type denpendency

  Griffan

  committed
  3ae7a9c

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Commits on Oct 10, 2019

• 1.Fixed compiling error introduced by HTSlib 64 bit reference positions

  Griffan

  committed
  7d2e2e7

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Commits on Sep 20, 2019

• Major modification on demuxlet and freemuxlet, including faster version of freemuxlet

  hyunminkang

  committed
  7b141e3

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Commits on Jul 23, 2019

• 1. Added dockerfile

  Griffan

  committed
  97e351b

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Commits on Jun 25, 2019

• 1.keep recovering scale of posterior probability for instances where IDE didn't pick up;

  Show description for b4cdb3a
  Griffan

  committed
  b4cdb3a

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Commits on Jun 21, 2019

• 1.recover scale of poterior probability

  Griffan

  committed
  495e13e

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Commits on Jun 19, 2019

• 1.fix bug in demuxlet output format

  Griffan

  committed
  74e7582

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Commits on Jun 4, 2019

• 1.fix gtfComp parameter type

  Griffan

  committed
  db43bef

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Commits on May 9, 2019

• Update README.md

  hyunminkang

  authored
  8ab2cf7

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Commits on Apr 25, 2019

• sync default genotyping error to 0.10 as demuxlet

  Griffan

  committed
  185dacc

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Commits on Apr 23, 2019

• add genotype error in evaluating posterior probability

  Griffan

  committed
  21b2475

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Commits on Apr 22, 2019

• add --init-dist option to import precomputed genetic distance matrix

  Griffan

  committed
  90e9296

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Commits on Apr 21, 2019

• reformat code

  Griffan

  committed
  aa677d5

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Commits on Mar 14, 2019

• 1.add exp() to bestPP

  Griffan

  committed
  acb53ea

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Commits on Mar 5, 2019

• 1.resolve potential std namespace problem

  Griffan

  committed
  758e503

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Commits on Feb 28, 2019

• 1.fix demuxlet output format description; 2. change default fraction of cells used to calculate distance matrix

  Griffan

  committed
  357ebed

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Commits on Feb 19, 2019

• Update README.md

  hyunminkang

  authored
  28ca2f3

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• Update README.md

  hyunminkang

  authored
  57f7cb9

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• Update README.md

  hyunminkang

  authored
  28c8cee

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