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Commits on Jan 7, 2025

• Update CHANGELOG for python 3.9 requirement

  MatthewThe

  committed
  bb6163f

• Update python version in github actions release

  MatthewThe

  committed
  81984d9

• Merge branch 'master' of github.com:statisticalbiotechnology/triqler

  MatthewThe

  committed
  58848b1

• Ready for v0.8.0

  MatthewThe

  committed
  98d7032

• Allow rounding errors up to 0.1% in system tests

  MatthewThe

  committed
  0fec37f

Commits on Dec 11, 2024

• Merge pull request #34 from jspaezp/chore/numpy2

  Show description for d9b37c6
  MatthewThe

  authored
  d9b37c6

Commits on Dec 4, 2024

• chore: update numpy to v2

  jspaezp

  committed
  1c571a7

• Update README to clarify that 0 intensities are considered missing values (Fixes #31)

  MatthewThe

  committed
  fab4b5f

Commits on Dec 3, 2024

• More descriptive IndexError when PEPs (or q-values?) cannot be calculated from score distribution (Fixes #29)

  MatthewThe

  committed
  a5017d8

• Better error message for same run name in different conditions (Fixes #30)

  MatthewThe

  committed
  2623461

Commits on Jul 12, 2024

• Fix percolator parser to support filename column

  MatthewThe

  committed
  1de2e63

Commits on Jan 4, 2024

• Ready for v0.7.3

  MatthewThe

  committed
  7550627

• Change README to markdown

  MatthewThe

  committed
  bd0d76c

• Fix DIA prior fitting matplotlib dependency

  MatthewThe

  committed
  53494ef

• Weaken pandas version requirement

  MatthewThe

  committed
  25e75f1

• Ready for v0.7.2

  MatthewThe

  committed
  ef342cd

• Fix poetry build-backend

  MatthewThe

  committed
  9c39ce8

• Fix merges hyperparameters.py

  MatthewThe

  committed
  c2c3693

• Merge branch 'master' of github.com:statisticalbiotechnology/triqler

  MatthewThe

  committed
  27bbbcc

• Replace multiprocessing_pool by job-pool package

  MatthewThe

  committed
  db9d5d8

• Update version retrieval

  MatthewThe

  committed
  8f1489b

Commits on Jan 3, 2024

• first pgm unit test

  MatthewThe

  committed
  b799257

• linting

  MatthewThe

  committed
  c3cdaa6

Commits on May 30, 2023

• Merge pull request #25 from JB91451/patch-1

  Show description for dbdc11f
  MatthewThe

  authored
  dbdc11f

Commits on May 25, 2023

• Update hyperparameters.py

  Show description for 373d464
  JB91451

  authored
  373d464

Commits on Apr 13, 2023

• Ready for v0.7.1

  MatthewThe

  committed
  fdd4ecd

• Add file list mapping functionality to DIA-NN converter. Fixes #20.

  MatthewThe

  committed
  36099c3

Commits on Apr 12, 2023

• Ready for v0.7

  MatthewThe

  committed
  5e02868

• Update ReadMe with next command line parameters

  MatthewThe

  committed
  91da47f

• Added DIA-NN to triqler converter and added scripts section to pyproject.toml

  MatthewThe

  committed
  8744e2a

• Clean up sub-packages and update release checklist

  MatthewThe

  committed
  4cd5ae5

• Add pandas as dependency for DIA prior

  MatthewThe

  committed
  7668736

• Merge branch 'patruong-DIA_prior'

  MatthewThe

  committed
  40ca986

Commits on Apr 8, 2023

• removed commented code, set boundaries for muDetect and sigmaDetect, added example data set

  patruong

  committed
  4faf6f6

Commits on Mar 9, 2023

• Now DIA prior code is the same as the one used in dia_sum, but i have some comments about the hyperparameter resetting. It is now removed... maybe it should not be removed? I tested and verified th…

  Show description for d7fee92
  patruong

  committed
  d7fee92

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