A .NET microscopy imaging application based on Bio library. Supports various microscopes by using imported libraries & GUI automation. Supports XInput game controllers to move stage, take images, run ImageJ macros on images or Bio C# scripts.

A cross platform version of Bio library & program. Bio is a library & program for annotating, & editing various microscopy imaging formats using Bioformats supported images. including whole slide, pyramidal & series.

VVVV node for high performance playback of image stacks in dx11

Image stacker based on OpenCV-rust

ImageJ plugin to preform image binarization based on a canny edge detection in 3 dimensions

Converts any image stack to a Stratovan Checkpoint file (*.ckpt) keeping specimen names and voxel sizes.

ImageJ reader plugin for TIA (Emispec) .ser image files

ImageJ/Fiji macro that crops any given image stack without having to load it into memory first.

ExtractSharpestPlane_JNH is an ImageJ/FIJI plugin to automatically extract the sharpest plane by highest SD from image stacks for large data sets.

Fiji Plugin for Smooth-Manifold-based MIP