🏥 Medical Text Mining and Information Extraction with spaCy

Code and pretrained model for paper "Learning to Summarize Radiology Findings"

Challenge on Textual Inference and Question Entailment in the Medical Domain https://sites.google.com/view/mediqa2019

Medical Question-Answering datasets prepared for the TREC 2017 LiveQA challenge (Medical Task)

HEAD-QA: A Healthcare Dataset for Complex Reasoning

🏥 Clinical NER with UMLS lookup 🏥

The medical question entailment data introduced in the AMIA 2016 Paper (Recognizing Question Entailment for Medical Question Answering)

Medical natural language parsing and utility library

Instructions and code to create for a table of UMLS, SNOMED or HPO concepts containing Dutch medical names, usable in named entity recognition and linking methods such MedCAT.

Generate Medical Summary/Clinical notes using GPT-2

Codebase for "Learning to ground medical text in a 3D human atlas (CoNLL 2020)".

AskDocs: A medical QA dataset

Negation detection in Dutch clinical text.

The repository for the SEVA PhysionNet publication "Semi-supervised Extraction, Validation and model-based Analysis of Medical Sections in MIMIC-III Patient Notes"

Guide to download and extract Dutch medical wikipedia articles.

Mammo Lingua is a GUI application for Name Entity Recognition (NER) and BIRADS Classification. The application is built using Python with PyQt5 for the GUI and SpaCy for NER. The goal is to provide a tool that can analyze medical texts, identify named entities, and classify BIRADS categories.

의료 분야 자연어처리 관련 논문 리뷰

Different approaches to classify sentences of abstracts from the PubMed RCT database. Authors: Mert Ertugrul, Johan Lokna, Nora Schneider

In this we finetuned the Gemini model with our own medical NER dataset and used to recognize Name Entities