Matplotlib styles for scientific plotting

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

Python package for information theory.

Python exercises accompanying the book "Neuronal Dynamics"

InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.

Platform for Calcium Imaging analysis. DEPRECATED.

This python code estimates conditional mutual information (CMI) and mutual information (MI) for discrete and/or continuous variables using a nearest neighbors approach.

Python implementation of the Mantel test, a significance test of the correlation between two distance matrices

Analysis for spatially modulated spiking activity, e.g. place cells, grid cells