A Python Package for Protein Dynamics Analysis

A generative world for general-purpose robotics & embodied AI learning.

Build complex types from simple blueprints with Pydantic

👻 Ghostty is a fast, feature-rich, and cross-platform terminal emulator that uses platform-native UI and GPU acceleration.

Feature-rich Python implementation of the tximport package for gene count estimation.

Official repository for the Boltz-1 biomolecular interaction model

Lightweight and extensible compatibility layer between dataframe libraries!

PyComplexHeatmap: A Python package to plot complex heatmap (clustermap)

Code for running RFdiffusion

Menu plugin for neovim ( supports nested menus ) made using volt

A Python type checker

Protein Structure Analysis

Extra blocks for scikit-learn pipelines.

Contrastive PCA

A high-performance BigWig and BigBed library in Rust

Python package built to ease deep learning on graph, on top of existing DL frameworks.

gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

Generate random test data for bioinformatics

Python pathlib-style classes for cloud storage services such as Amazon S3, Azure Blob Storage, and Google Cloud Storage.

Plot correlation between authors of papers

A lightweight python-only library for reading and writing SMILES strings

Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)

Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning

LoRA for protein language models

PDBeMolstar as anywidget

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

The Python micro framework for building web applications.

Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch

a Hassle-Free Python Experience