From 8092954f19c5d44f0a08d15e85df82bbfb26d931 Mon Sep 17 00:00:00 2001
From: David Wilkins <david@wilkox.org>
Date: Tue, 28 Mar 2023 15:14:41 +1030
Subject: [PATCH] R CMD checks and reverse dependencies

---
 .github/workflows/R-CMD-check.yaml |  6 +++---
 cran-comments.md                   | 18 ++++++++++-------
 revdep/.gitignore                  |  1 +
 revdep/README.md                   | 31 +++++++++++++++---------------
 4 files changed, 30 insertions(+), 26 deletions(-)

diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
index ef18331..fa1b65d 100644
--- a/.github/workflows/R-CMD-check.yaml
+++ b/.github/workflows/R-CMD-check.yaml
@@ -1,8 +1,8 @@
-# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
-# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
+# workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
 on:
   push:
-    branches: [main, master, CRAN]
+    branches: [main, master, cran]
   pull_request:
     branches: [main, master]
 
diff --git a/cran-comments.md b/cran-comments.md
index c43e872..c26fb4e 100644
--- a/cran-comments.md
+++ b/cran-comments.md
@@ -1,13 +1,17 @@
-# Test environments
+# R CMD check results
 
-* local macOS install, R 4.0.3
-* ubuntu 16.04.6 (on travis-ci), R-devel, 4.0.2, 3.6.3
-* win-builder (with `devtools::check_win_release()`)
+0 errors | 0 warnings | 0 notes
 
-# R CMD check results
+# Test environments
 
-There were no ERRORs, WARNINGs or NOTEs.
+- local macOS install, R 4.2.3
+- ubuntu 22.04.2 (using GitHub Actions), 4.2.3
+- winbuilder R 4.3.0 alpha (with `devtools::check_win_release()`)
 
 # Downstream dependencies
 
-There are no downstream dependencies of this package on CRAN.
+We checked 3 reverse dependencies (1 from CRAN + 2 from Bioconductor),
+comparing R CMD check results across CRAN and dev versions of this package.
+
+- We saw 0 new problems
+- We failed to check 0 packages
diff --git a/revdep/.gitignore b/revdep/.gitignore
index 31f6c40..bc768ae 100644
--- a/revdep/.gitignore
+++ b/revdep/.gitignore
@@ -4,3 +4,4 @@ checks.noindex
 library.noindex
 data.sqlite
 *.html
+cloud.noindex
diff --git a/revdep/README.md b/revdep/README.md
index bd156cb..9d7c9b5 100644
--- a/revdep/README.md
+++ b/revdep/README.md
@@ -1,24 +1,23 @@
 # Platform
 
-|field    |value                        |
-|:--------|:----------------------------|
-|version  |R version 4.0.3 (2020-10-10) |
-|os       |macOS Big Sur 10.16          |
-|system   |x86_64, darwin19.6.0         |
-|ui       |unknown                      |
-|language |(EN)                         |
-|collate  |en_AU.UTF-8                  |
-|ctype    |en_AU.UTF-8                  |
-|tz       |Australia/Sydney             |
-|date     |2020-12-10                   |
+|field    |value                            |
+|:--------|:--------------------------------|
+|version  |R version 4.2.3 (2023-03-15)     |
+|os       |macOS Ventura 13.2.1             |
+|system   |aarch64, darwin22.3.0            |
+|ui       |unknown                          |
+|language |(EN)                             |
+|collate  |en_AU.UTF-8                      |
+|ctype    |en_AU.UTF-8                      |
+|tz       |Australia/Sydney                 |
+|date     |2023-03-28                       |
+|pandoc   |3.1.1 @ /opt/homebrew/bin/pandoc |
 
 # Dependencies
 
-|package  |old   |new   |Δ  |
-|:--------|:-----|:-----|:--|
-|gggenes  |0.4.0 |0.4.1 |*  |
-|jsonlite |NA    |1.7.2 |*  |
-|ps       |NA    |1.5.0 |*  |
+|package |old   |new   |Δ  |
+|:-------|:-----|:-----|:--|
+|gggenes |0.4.1 |0.5.0 |*  |
 
 # Revdeps