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8 stars written in Shell
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This repo aims to help Logseq users to sync their data with Git and GitHub.

Shell 1,124 95 Updated Apr 18, 2024

bioBakery tools for meta'omic profiling

Shell 265 75 Updated Oct 19, 2024

fastq to polished sequenses: pipeline suitable for mixed samples and long (Nanopore) reads

Shell 43 11 Updated Jul 31, 2024

Gene Absence Presence Identification tool.

Shell 26 4 Updated Sep 14, 2023

Reference-quality genome reconstruction from complex metagenomes (or bacterial isolates) using only Nanopore long reads or both long and short reads (hybrid strategy)

Shell 26 1 Updated Oct 17, 2023

Downsample fastq files in an automated way

Shell 12 4 Updated May 7, 2020

Find Prokaryotic DNA methylase genes in proteins, contigs, or genomes

Shell 9 Updated Jun 13, 2024