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Commits on Nov 18, 2024

• Progressive multitask patch (deepchem#4177)

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  spellsharp

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• Add InceptionV3 model for deepvariant (deepchem#4167)

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  KitVB

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Commits on Nov 12, 2024

• Adding HF CI (deepchem#4173)

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  Shiva-sankaran

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• Bug Fixs nov 2024 (deepchem#4175)

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  shreyasvinaya

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• Adds lamb optimizer to Deepchem (deepchem#4168)

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  riya-singh28

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Commits on Nov 6, 2024

• Adding OneFormer model to DeepChem (deepchem#4146)

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  aaronrockmenezes

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Commits on Oct 31, 2024

• Robust baseclass (deepchem#4154)

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  spellsharp

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Commits on Oct 30, 2024

• Wdg poly primary util (deepchem#4021)

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  TRY-ER

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• doc fix (deepchem#4156)

  KitVB

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Commits on Oct 28, 2024

• Added Pileup Featurizer to get pileup images from haplotype windows (deepchem#4151)

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  KitVB

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Commits on Oct 24, 2024

• Add MoLFormer model to DeepChem (deepchem#4145)

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  riya-singh28

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Commits on Oct 21, 2024

• Update notebook reference (deepchem#4024)

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  emmanuel-ferdman

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Commits on Oct 18, 2024

• Tutorial bioinfo (deepchem#4080)

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  Harindhar10

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Commits on Oct 17, 2024

• fix mtr finetuning (deepchem#4143)

  riya-singh28

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Commits on Oct 16, 2024

• added functionality to align reads using ssw algorithm (deepchem#4142)

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  KitVB

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Commits on Oct 15, 2024

• modified wrong comment in tutorial and output section (deepchem#4140)

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Commits on Oct 14, 2024

• Weighted Directed Graph Validator Setup (deepchem#4020)

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• fixing pyparsing issue in unit-tests by pinning to supported version only for python 3.8 (deepchem#4139)

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Commits on Oct 13, 2024

• Added attribute descriptors to RDKitDescriptors (deepchem#4138)

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  frenio

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Commits on Oct 7, 2024

• Added PyTorch implementation for creating custom graph convolution in TUTORIAL (deepchem#4134)

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  spellsharp

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Commits on Sep 20, 2024

• added polymer tutorials to the readme (deepchem#4125)

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  TRY-ER

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• fixing the render issue for PSMILES tutorial (deepchem#4124)

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• Antibody Modeling (WIP) (deepchem#4106)

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  dhuvik

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• comment protbert test (deepchem#4122)

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  sudo-rsingh

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Commits on Sep 16, 2024

• Cleanup 3 [Requirements] (deepchem#4114)

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  sudo-rsingh

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Commits on Sep 11, 2024

• Cleanup - 2 (deepchem#4113)

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  sudo-rsingh

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• fix to get accurate pileups with pysam (deepchem#4121)

  KitVB

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Commits on Sep 6, 2024

• Cleanup-1 [termination condition and init file] (deepchem#4109)

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  sudo-rsingh

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Commits on Aug 23, 2024

• Tutorial on PolyBERT (deepchem#4105)

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  TRY-ER

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• Torch Model and tests for smiles2vec (deepchem#4045)

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  harishwar017

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Commits on Aug 21, 2024

• adding functionality to find candidate windows (deepchem#4102)

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  KitVB

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• Fill Mask Pipeline to HuggingFace Model (deepchem#4092)

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  dhuvik

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• ESM-2 Fine-Tuning for Protein Binding Sites Prediction Tutorial + UniProt Data Processing Guide (deepchem#4081)

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  elisagdelope

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Commits on Aug 19, 2024

• Rebased Protein LM Tutorial w. Elisa (deepchem#4082)

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  dhuvik

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• Fixing image rendering for graph tutorial (deepchem#4093)

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  TRY-ER

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