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Evolutionary Genomics & Bioinformatics
- Queen Mary University London
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16:27
(UTC) - https://wurmlab.com
- @yannick__
- https://sequenceserver.com
- https://pollinator.health
- https://sensibee.io
Stars
cpanminus - get, unpack, build and install modules from CPAN
MITObim - mitochondrial baiting and iterative mapping
Tools for working with second gen assemblies, fasta sequences, etc
RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference transposable elements. Please read the wiki page (link belo…
Genome Scripts used in fungal comparative genomics
Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved Domain Database and Nucleotide divisions, Gene Ontology, UniP…
A tutorial for learning de novo assembly
Workflows I find helpful for fungal genome annotation
NaS is a hybrid approach developped to take advantage of data generated using MinION device. We combine Illumina and Oxford Nanopore technologies to produce NaS (Nanopore Synthetic-long) reads of u…
Helper Perl scripts and tree files associated with the EukProt database of genome-scale eukaryotic protein sequence data sets.
A few scripts for turning a vanilla NCBI wwwblast installation into a link filled paradise.