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Commits on Nov 6, 2019

• Allow specifying chromosome name when retrieving mitochondrial genes. (scverse#902)

  Show description for 0200814
  

  ghuls

  authored and

  flying-sheep

  committed
  0200814

• remove text box border

  flying-sheep

  authored
  19d7cd2

Commits on Nov 5, 2019

• Switch to normalize_total in sc.pl.highest_expr_genes (scverse#901)

  Show description for da0ffd7
  gokceneraslan

  authored
  da0ffd7

Commits on Oct 30, 2019

• Merge pull request scverse#899 from theislab/layer_to_violin

  Show description for c02d285
  fidelram

  authored
  c02d285

• updated test image; fixed black

  fidelram

  committed
  fdbff3f

• updated violin test image for notebook related to the new default cut=0

  fidelram

  committed
  723766b

• added violin test image with layer

  fidelram

  committed
  948895f

• added violin test with layer

  fidelram

  committed
  fabe118

• added support for layers to sc.pl.violin. Added cut=0 as default, similar to stacked_violin

  fidelram

  committed
  770de20

Commits on Oct 29, 2019

• Inherit main requirements (scverse#898)

  flying-sheep

  authored
  6f72225

• Update MAGIC API and docs (scverse#896)

  

  scottgigante

  authored and

  flying-sheep

  committed
  784387e

• Fix plot issues (scverse#893)

  Show description for 27115e3
  

  fidelram

  authored and

  flying-sheep

  committed
  27115e3

Commits on Oct 25, 2019

• Fix remaining docs (scverse#894)

  flying-sheep

  authored
  48a11bc

• Unify fontsize/weight params (scverse#892)

  flying-sheep

  authored
  b3933ac

Commits on Oct 24, 2019

• Fix mnn_correct for degenerate case

  flying-sheep

  authored
  1611d63

Commits on Oct 20, 2019

• Link to matrixplot

  flying-sheep

  committed
  e6e08e5

• Export dendrogram

  flying-sheep

  committed
  07d1b4c

Commits on Oct 19, 2019

• Fix the rest of the docs (scverse#881)

  flying-sheep

  authored
  5f84ab3

• tl doc fixes (scverse#880)

  flying-sheep

  authored
  dd892fa

• Update pp docs (scverse#879)

  flying-sheep

  authored
  2cb54f0

• Add and use bright logo

  flying-sheep

  committed
  f112719

Commits on Oct 18, 2019

• Style

  flying-sheep

  committed
  5dd8a72

• Install typing_extensions in docs

  flying-sheep

  committed
  18fd777

• First docstring line can’t contain references

  flying-sheep

  committed
  7fec83f

• Fixed scvelo inventory URL

  flying-sheep

  committed
  172a1a4

• Use typing.Literal (scverse#878)

  flying-sheep

  authored
  f539870

• Low hanging formatting fruit (scverse#877)

  flying-sheep

  authored
  ffb0685

Commits on Oct 10, 2019

• Merge pull request scverse#869 from fidelram/fix_pl_paga

  Show description for 724da7d
  fidelram

  authored
  724da7d

• remove unneeded imports and added a couple of lines before functions to fulfull Pep8

  fidelram

  committed
  f572f88

• fix test errors

  fidelram

  committed
  2cc2e82

• update paga test

  fidelram

  committed
  5ed73b0

• remove redundant code in _utils and move code from scatterplots to _utils. Rename color by the current number of colors

  fidelram

  committed
  f5e4ae9

Commits on Oct 9, 2019

• Merge pull request scverse#867 from fidelram/fix_density_title

  Show description for e4dd5ee
  fidelram

  authored
  e4dd5ee

• fix repeated title when plotting multiple panels

  fidelram

  committed
  61e6460

Commits on Oct 8, 2019

• Change _get_mean_var dispatch

  Show description for be2401e
  ivirshup

  committed
  be2401e

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