dumpContigsFromHeader.md

% DUMPCONTIGSFROMHEADER(1) dumpContigsFromHeader (vcflib) | dumpContigsFromHeader (VCF transformation) % Erik Garrison and vcflib contributors

NAME

dumpContigsFromHeader

SYNOPSIS

dumpContigsFromHeader file

DESCRIPTION

Dump contigs from header

EXAMPLES

Example:

    **dumpContigsFromHeader** samples/scaffold612.vcf

    ##contig=<ID=scaffold4,length=1524>
    ##contig=<ID=scaffold12,length=56895>
    (...)

    output

    scaffold4       1524
    scaffold12      56895
    (...)

Type: transformation
      

EXIT VALUES

0 : Success

not 0 : Failure

SEE ALSO

vcflib(1)

OTHER

Source code

dumpContigsFromHeader.cpp

LICENSE

Copyright 2011-2020 (C) Erik Garrison and vcflib contributors. MIT licensed.