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17 stars written in R
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A general-purpose tool for dynamic report generation in R

R 2,402 878 Updated Dec 17, 2024

Rmd source files for the HarvardX series PH525x

R 2,013 1,954 Updated Feb 12, 2024

Data for the HarvardX courses: PH525x

R 271 701 Updated Aug 26, 2015

R package for "sum of single effects" regression.

R 188 48 Updated Aug 1, 2024

R package to estimate q-values and false discovery rate quantities.

R 113 36 Updated Sep 1, 2023

Fit Gamma-Poisson Generalized Linear Models Reliably

R 105 15 Updated Dec 9, 2024

Rapid standardisation and quality control of GWAS or QTL summary statistics

R 76 15 Updated Dec 18, 2024

Matrix eQTL: Ultra fast eQTL analysis via large matrix operations

R 65 17 Updated Sep 26, 2023

slurmR: A Lightweight Wrapper for Slurm

R 58 12 Updated Jun 17, 2024

Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types

R 24 7 Updated Oct 13, 2021

Code for creating cell-type-specific regulatory element annotation files

R 18 8 Updated Jun 11, 2024

Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data

R 8 2 Updated Dec 21, 2021

R version of GxEScan

R 7 1 Updated Oct 23, 2024

Score Test Based on Saddlepoint Approximation

R 5 3 Updated Nov 1, 2020

All code used in FIGI analyses, plots, documentation, presentations.

R 1 Updated Feb 27, 2020

Converts VCF files to a binary format

R 1 2 Updated Sep 26, 2024