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A pipeline for phasing UK Biobank whole genome sequence data

Shell 15 5 Updated Mar 21, 2023

Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DNAnexus webinars, online trainings and workshops.

Jupyter Notebook 139 49 Updated Jul 30, 2024

A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

6,231 628 Updated Dec 4, 2024

Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium. These files can be used as standard resource of BED files …

HTML 76 6 Updated Nov 16, 2022

Bayesian haplotype-based mutation calling

C++ 305 37 Updated Aug 12, 2023