Update IEU GWAS API #92
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| name: rworkflows | ||
| 'on': | ||
| push: | ||
| branches: | ||
| - master | ||
| - main | ||
| - devel | ||
| - RELEASE_** | ||
| pull_request: | ||
| branches: | ||
| - master | ||
| - main | ||
| - devel | ||
| - RELEASE_** | ||
| jobs: | ||
| rworkflows: | ||
| permissions: write-all | ||
| runs-on: ${{ matrix.config.os }} | ||
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
| container: ${{ matrix.config.cont }} | ||
| strategy: | ||
| fail-fast: ${{ false }} | ||
| matrix: | ||
| config: | ||
| #- os: ubuntu-latest | ||
| # r: devel | ||
| # bioc: devel | ||
| cont: bioconductor/bioconductor_docker:devel | ||
| - os: macOS-latest | ||
| #r: latest | ||
| #bioc: release | ||
| r: devel | ||
| bioc: devel | ||
| cont: bioconductor/bioconductor_docker:devel | ||
| # - os: windows-latest | ||
| # r: latest | ||
| # bioc: release | ||
| steps: | ||
| - uses: neurogenomics/rworkflows@master | ||
| with: | ||
| run_bioccheck: ${{ true }} | ||
| run_rcmdcheck: ${{ true }} | ||
| as_cran: ${{ true }} | ||
| run_vignettes: ${{ true }} | ||
| has_testthat: ${{ true }} | ||
| run_covr: ${{ true }} | ||
| run_pkgdown: ${{ true }} | ||
| has_runit: ${{ false }} | ||
| has_latex: ${{ false }} | ||
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | ||
| run_docker: ${{ true }} | ||
| docker_user: almurphy | ||
| docker_org: neurogenomicslab | ||
| DOCKER_TOKEN: ${{ secrets.DOCKER_TOKEN }} | ||
| runner_os: ${{ runner.os }} | ||
| timeout: ${{ 2000 }} | ||
| cache_version: cache-v1 | ||
| free_disk_space: ${{ true }} | ||
