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  • Harbin Institute of Technology

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A General Medical Image Segmentation Framework.(Multi-Modal, Mono-Modal, 2D, 3D)

Python 9 Updated May 4, 2023

3D Medical Image Segmentation Pytorch

Python 13 2 Updated Aug 16, 2022

MedicalSeg is an easy-to-use 3D medical image segmentation toolkit that supports the whole segmentation process. Specially, We provide data preprocessing acceleration, high precision model on COVID…

Python 70 16 Updated Dec 14, 2022

Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)

Python 47 8 Updated Dec 5, 2023

3D Medical Image Segmentation ModelsοΌŒι›†ζˆε„η§εŒ»ε­¦ε›Ύεƒεˆ†ε‰²ζ¨‘εž‹ηš„ε°ζ‘†ζžΆοΌŒδΈ»θ¦ζ˜―3DοΌŒζŒη»­ζ›΄ζ–°...

Python 76 12 Updated Dec 21, 2021

residual attention unet for tumor segmentation (liver and brain)

Python 128 36 Updated Jun 4, 2019

Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation

Python 1,932 424 Updated Nov 13, 2020

πŸ€ Pytorch implementation of various Attention Mechanisms, MLP, Re-parameter, Convolution, which is helpful to further understand papers.⭐⭐⭐

Python 11,650 1,945 Updated Dec 6, 2024

AI Toolkit for Healthcare Imaging

Python 6,001 1,108 Updated Dec 30, 2024

Applying 3D CNN for bio-medical images segmentation with 3D-Unet, Residual 3D-Unet and Recurrent Residual 3D-Unet (R2U3D) implemented in PyTorch.

Jupyter Notebook 15 4 Updated Jul 12, 2022

Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.

Python 121 26 Updated Nov 15, 2021

3D-Unet: patched based Pytorch implementation for medical images segmentation

Python 63 12 Updated Sep 22, 2021

3D U-Net model for volumetric semantic segmentation written in pytorch

Jupyter Notebook 2,072 517 Updated Jan 4, 2025
Python 2 1 Updated Aug 6, 2018
Python 1 Updated Aug 6, 2018

MICCAI 2022: Calibrating Label Distribution for Class-Imbalanced Barely-Supervised Knee Segmentation

Python 49 2 Updated Jan 21, 2024

Thesis & Code for my Segmentation and Age Prediction Model using CNNs and MRIs

Jupyter Notebook 24 7 Updated Aug 21, 2017

Lung Segmentation UNet model on 3D CT scans

Python 49 7 Updated Dec 10, 2019

3D Segmentation Pytorch version(unet basic model)

Python 17 7 Updated Apr 17, 2018

MONAI Tutorials

Jupyter Notebook 1,924 696 Updated Dec 20, 2024

Aim πŸ’« β€” An easy-to-use & supercharged open-source experiment tracker.

Python 5,292 326 Updated Jan 4, 2025
Python 16 5 Updated Dec 21, 2020

A collection of loss functions for medical image segmentation

Python 3,846 605 Updated Nov 1, 2023

🀘 awesome-semantic-segmentation

10,571 2,485 Updated May 8, 2021

Semantic segmentation models with 500+ pretrained convolutional and transformer-based backbones.

Python 9,881 1,694 Updated Jan 3, 2025

[IEEE TMI] Official Implementation for UNet++

Python 2,348 544 Updated Nov 15, 2023

MRI image of rectal cancer segmentation using3D U-net baseline

Python 1 Updated Oct 20, 2021

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

Python 1 Updated Feb 7, 2022

Automatic Segmentation of Knee Cartilage from MRI using Deep Learning

Python 18 8 Updated May 6, 2021
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