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Ultimagen / healthomics-workflows

UltimaGenomics repository for workflows compatible with AWS HealthOmics

WDL 12 4 Updated Feb 18, 2025

broadinstitute / ichorCNA

Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.

R 177 88 Updated Mar 20, 2024

AmrR101 / SLiPiR-seq

Forked from JinyongHuang/SLiPiR-seq
R 1 Updated Nov 15, 2023

getzlab / rnaseqc

Fast, efficient RNA-Seq metrics for quality control and process optimization

C++ 156 19 Updated Nov 2, 2024

Magdoll / SQANTI2

SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3

Python 38 15 Updated Jun 14, 2020

Magdoll / cDNA_Cupcake

Miscellaneous collection of Python and R scripts for processing Iso-Seq data

Python 262 102 Updated Sep 26, 2023

AmrR101 / scRNA-seq_online

Forked from hbctraining/scRNA-seq_online
R 1 Updated Aug 26, 2020

AmrR101 / scRNA-seq_notes

Forked from mdozmorov/scRNA-seq_notes

A list of scRNA-seq analysis tools

R 1 Updated Oct 18, 2020

AmrR101 / scRNAseq-analysis-notes

Forked from crazyhottommy/scRNAseq-analysis-notes

scRNAseq analysis notes from Ming Tang

1 Updated Nov 24, 2020

holtzy / data_to_viz

Leading to the dataviz you need

HTML 1,008 285 Updated Oct 18, 2024

BaderLab / EnrichmentMap_docs

End-User Documentation for the EnrichmentMap Cytoscape App

Python 3 1 Updated Oct 7, 2024
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