Commits

Branch selector

 master

User selector

gaow

Datepicker

All time

Commit History

Commits on Apr 16, 2024

• another fix on attainable CS

  gaow

  committed
  290a700

  Copy full SHA for 290a700

• Handle alpha matrix with only 1 row

  gaow

  committed
  266fe48

  Copy full SHA for 266fe48

Commits on Apr 14, 2024

• Add an implementation of attainable coverage from SparsePro method, PLoS Genetics 2023

  gaow

  committed
  7d8d07a

  Copy full SHA for 7d8d07a

Commits on Mar 29, 2024

• Merge pull request gaow#6 from SamuelSun2000/master

  Show description for ea56c07
  gaow

  authored
  ea56c07

  Copy full SHA for ea56c07

Commits on Mar 28, 2024

• Merge pull request gaow#5 from SamuelSun2000/master

  Show description for d8c8824
  gaow

  authored
  d8c8824

  Copy full SHA for d8c8824

Commits on Feb 14, 2024

• Bump susieR version

  gaow

  committed
  ef877f8

  Copy full SHA for ef877f8

• Merge branch 'stephenslab:master' into master

  gaow

  authored
  608a984

  Copy full SHA for 608a984

Commits on Feb 13, 2024

• Fix an indexing error about purity

  gaow

  committed
  9f5a228

  Copy full SHA for 9f5a228

Commits on Feb 1, 2024

• Update DESCRIPTION

  gaow

  authored
  2b6fab1

  Copy full SHA for 2b6fab1

• Merge pull request gaow#4 from SamuelSun2000/master

  Show description for 1d14458
  gaow

  authored
  1d14458

  Copy full SHA for 1d14458

Commits on Jan 26, 2024

• Merge pull request stephenslab#217 from aksarkar/speed-up-diagnostic

  Show description for 56a89f2
  gaow

  authored
  56a89f2

  Copy full SHA for 56a89f2

Commits on Jan 24, 2024

• Update DESCRIPTION

  gaow

  authored
  5604aef

  Copy full SHA for 5604aef

• Merge pull request gaow#3 from SamuelSun2000/master

  Show description for 4bf205d
  gaow

  authored
  4bf205d

  Copy full SHA for 4bf205d

Commits on Jan 22, 2024

• Improve the use of correlateR to speed up cov2cor

  gaow

  committed
  2e36a6b

  Copy full SHA for 2e36a6b

• Merge pull request gaow#2 from baiyunshen2001/replace_cov2cor

  Show description for aded2e8
  gaow

  authored
  aded2e8

  Copy full SHA for aded2e8

Commits on Dec 23, 2023

• Release version 0.14.1

  gaow

  committed
  31d6191

  Copy full SHA for 31d6191

Commits on Dec 21, 2023

• Merge branch 'stephenslab:master' into master

  gaow

  authored
  2691553

  Copy full SHA for 2691553

Commits on Nov 15, 2023

• Add a parameter purity filter median_abs_corr

  gaow

  committed
  df280c3

  Copy full SHA for df280c3

Commits on Oct 21, 2023

• Add some ash code; possibly wrong

  gaow

  committed
  3735e09

  Copy full SHA for 3735e09

Commits on Oct 5, 2023

• Add an additional filter for causal variants to exclude outlier index

  gaow

  committed
  433e144

  Copy full SHA for 433e144

Commits on Oct 3, 2023

• Minor update on comments

  gaow

  committed
  86bacb3

  Copy full SHA for 86bacb3

• Minor clean up

  gaow

  committed
  6e5392c

  Copy full SHA for 6e5392c

Commits on Oct 2, 2023

• Allow checking on existing causal variants identified for outlier and exclude

  gaow

  committed
  056254b

  Copy full SHA for 056254b

Commits on Oct 1, 2023

• Reduce stablizer setting to 5

  gaow

  committed
  64c12d9

  Copy full SHA for 64c12d9

• Add exclude existing outlier to dentist-s test

  gaow

  committed
  30c94a0

  Copy full SHA for 30c94a0

• handle ill-conditioned R matrix

  gaow

  committed
  fea8522

  Copy full SHA for fea8522

• Add a sign flip test

  gaow

  committed
  ca1c0d1

  Copy full SHA for ca1c0d1

• Renormalize alpha and get PIP again at the end of the analysis after removing outliers

  gaow

  committed
  212b78e

  Copy full SHA for 212b78e

• Allow 10 extra iterations to stablize outlier detection

  gaow

  committed
  bc4fdb8

  Copy full SHA for bc4fdb8

Commits on Sep 30, 2023

• Fix typo in z-score

  gaow

  committed
  6765764

  Copy full SHA for 6765764

• Fix typo in z-score

  gaow

  committed
  9a58f14

  Copy full SHA for 9a58f14

• A temporary solution to make outlier test more robust to r2=1

  gaow

  committed
  0ee43b6

  Copy full SHA for 0ee43b6

• Fix bugs in get_non_zero_effects_proxy and detect_zR_discrepancy; overall algorithm not changed

  gaow

  committed
  69b2ef0

  Copy full SHA for 69b2ef0

• A first draft implementing QC in susie_rss

  gaow

  committed
  0b98ede

  Copy full SHA for 0b98ede

Commits on Jul 30, 2022

• Add column names to CS correlation summary

  gaow

  committed
  c39ab77

  Copy full SHA for c39ab77

Pagination

Previous

Next